Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2938 |
Symbol | rbn |
ID | 6988430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 3183281 |
End bp | 3184213 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643381216 |
Product | ribonuclease BN |
Protein accession | YP_002264266 |
Protein GI | 209696335 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGAGA AGTTTAAATA TTCGCTAAGG ATTAGCTGGT CATATTTTTT ATTTTTAAAG CAACGCATTA TTCATGACCG ATTAACGGTC AGTGCGGGTT ATATGGCCTA TATTACGTTG TTATCATTGG TTCCTTTAGT CACTGTCTTA CTTTCTGTGT TATCTCAGTT TCCTATTTTT TCAGGAGCTG GAGAGACAGT ACAAGAGTTT GTTATTCAGA ACTTTGTACC AGCCGCCAGT GATGCGGTTG AAGGAAGTCT GAAAGAATTT ATTTCAAATA CGGGCAAGAT GACTGCCGTC GGGTCTGGGT TCTTATTTGT TGCCTCTGTG ATGTTGATAT CGGCAATTGA CCGTAGCTTG AATTACATTT GGCGAGTGAA GAAAAAGCGT CGTCCAATGT ATTCATTTTC ATTGTATTGG ATGATTTTAA CCTTAGGTCC ATTATTGGTT TGGGCTAGCT TAGCGGCGAC ATCGTATGTG ACGTCATTAA ACATTATGGA TGATGAAATC GTCTCCAGTT TTTATCGAAC GCTGCTGGGG TGGTTACCTA TTATTTTGTC ATTCTCAGCA TTTTTAGGCT TGTATTTACT GGTTCCAAAT AAAAAAATAC GAGTAAGACA CGCGCTTGTT GGTGCGATGT CAGCAGGGTG CTTGTTTGAA GTCAGCAAGG TGGGTTTTGC ACAATACATT ACGCAATTTC CATCTTATGA AGTTATTTAT GGCGCTTTAG CGGCGGTACC GATTCTATTT GTATGGATTT ATCTGTGTTG GATCATTGTG TTAATTGGTG CAGAAATCAC TGCAAGTCTG GGTGAATCCG ATCAGTGGTT GATAGATAAA ATAAATACGC ATGTATTTGA TGCTGAGAAT ACGGTATTAA CAGAATCAAA AGGATTAACA GAAAGTGATA GCACTGATCC AAAGAGTAAG TGA
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Protein sequence | MEEKFKYSLR ISWSYFLFLK QRIIHDRLTV SAGYMAYITL LSLVPLVTVL LSVLSQFPIF SGAGETVQEF VIQNFVPAAS DAVEGSLKEF ISNTGKMTAV GSGFLFVASV MLISAIDRSL NYIWRVKKKR RPMYSFSLYW MILTLGPLLV WASLAATSYV TSLNIMDDEI VSSFYRTLLG WLPIILSFSA FLGLYLLVPN KKIRVRHALV GAMSAGCLFE VSKVGFAQYI TQFPSYEVIY GALAAVPILF VWIYLCWIIV LIGAEITASL GESDQWLIDK INTHVFDAEN TVLTESKGLT ESDSTDPKSK
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