Gene VSAL_I2938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2938 
Symbolrbn 
ID6988430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp3183281 
End bp3184213 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content39% 
IMG OID643381216 
Productribonuclease BN 
Protein accessionYP_002264266 
Protein GI209696335 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAGA AGTTTAAATA TTCGCTAAGG ATTAGCTGGT CATATTTTTT ATTTTTAAAG 
CAACGCATTA TTCATGACCG ATTAACGGTC AGTGCGGGTT ATATGGCCTA TATTACGTTG
TTATCATTGG TTCCTTTAGT CACTGTCTTA CTTTCTGTGT TATCTCAGTT TCCTATTTTT
TCAGGAGCTG GAGAGACAGT ACAAGAGTTT GTTATTCAGA ACTTTGTACC AGCCGCCAGT
GATGCGGTTG AAGGAAGTCT GAAAGAATTT ATTTCAAATA CGGGCAAGAT GACTGCCGTC
GGGTCTGGGT TCTTATTTGT TGCCTCTGTG ATGTTGATAT CGGCAATTGA CCGTAGCTTG
AATTACATTT GGCGAGTGAA GAAAAAGCGT CGTCCAATGT ATTCATTTTC ATTGTATTGG
ATGATTTTAA CCTTAGGTCC ATTATTGGTT TGGGCTAGCT TAGCGGCGAC ATCGTATGTG
ACGTCATTAA ACATTATGGA TGATGAAATC GTCTCCAGTT TTTATCGAAC GCTGCTGGGG
TGGTTACCTA TTATTTTGTC ATTCTCAGCA TTTTTAGGCT TGTATTTACT GGTTCCAAAT
AAAAAAATAC GAGTAAGACA CGCGCTTGTT GGTGCGATGT CAGCAGGGTG CTTGTTTGAA
GTCAGCAAGG TGGGTTTTGC ACAATACATT ACGCAATTTC CATCTTATGA AGTTATTTAT
GGCGCTTTAG CGGCGGTACC GATTCTATTT GTATGGATTT ATCTGTGTTG GATCATTGTG
TTAATTGGTG CAGAAATCAC TGCAAGTCTG GGTGAATCCG ATCAGTGGTT GATAGATAAA
ATAAATACGC ATGTATTTGA TGCTGAGAAT ACGGTATTAA CAGAATCAAA AGGATTAACA
GAAAGTGATA GCACTGATCC AAAGAGTAAG TGA
 
Protein sequence
MEEKFKYSLR ISWSYFLFLK QRIIHDRLTV SAGYMAYITL LSLVPLVTVL LSVLSQFPIF 
SGAGETVQEF VIQNFVPAAS DAVEGSLKEF ISNTGKMTAV GSGFLFVASV MLISAIDRSL
NYIWRVKKKR RPMYSFSLYW MILTLGPLLV WASLAATSYV TSLNIMDDEI VSSFYRTLLG
WLPIILSFSA FLGLYLLVPN KKIRVRHALV GAMSAGCLFE VSKVGFAQYI TQFPSYEVIY
GALAAVPILF VWIYLCWIIV LIGAEITASL GESDQWLIDK INTHVFDAEN TVLTESKGLT
ESDSTDPKSK