| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2923 |
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| Symbol | epsE |
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| ID | 6988448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 3164916 |
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| End bp | 3166415 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643381202 |
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| Product | general secretion pathway protein E |
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| Protein accession | YP_002264252 |
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| Protein GI | 209696321 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGGACA TGCTGTTTCC TCATTCTGTC GCGGTACTGC GTTTGCCTTT TTCATTTGCA
AAAAGGCACT CAGTGGTTAT TGAACTCAGA CCTGAAGGTT GGGTGTTGTT CTATGTAACA
ACACCGTCAC CGATGGTGTT GTGTGAAATT CGACGTGTAT GTAAATCGGA ATTTTCATTA
AGCCAATTAG AAAAAGAAGA GTTCGATACG AAAGTGACTC AGGTATACCA ACGTAATTCA
TCAGAAGCAC AGCAATTGAT GGAAGACATT GGGGCTGATA ACGATGACTT CTTTTCGTTG
GCTGAAGAAC TGCCAGACAA TGACGATTTA TTAGAATCAG AAGATGATGC GCCCATTATT
AAATTGATTA ACGCCATGTT AGGTGAAGCA ATCAAAGAAG GGGCGTCGGA TATTCACATT
GAAACGTTCG AAAAAGTATT GTCGATTCGT TTTCGTGTCG ATGGTATTTT GCGTGATGTC
ATTAGCCCAA GTCGTAAACT AGCGCCGTTA TTGGTCTCTC GTGTGAAAGT GATGTCCAAG
TTGGATATCG CCGAAAAACG TGTCCCTCAA GATGGTCGTA TTTCATTGCG TATCGGTGGA
CGAGCCGTCG ATGTGCGTGT GTCTACCATG CCGTCGTCTC ATGGTGAGCG TGTGGTAATG
CGTTTATTGG ATAAGAACGC CACTCGCCTT GATTTACACA GCTTAGGTAT GACTGCGGAT
AATCATCAAA AATTCCAACA TATCATTAAA CGACCTCATG GCATTATTCT TGTTACTGGT
CCAACTGGGT CTGGTAAATC GACGACGTTA TATGCAGGGT TAGGTGAATT AGACAGCACT
CAATCAAACA TATTAACGGT TGAAGACCCG ATTGAATTTG ATATTGATGG CATTGGTCAA
ACGCAAGTAA ACCCAAAGGT TGATATGACG TTTGCTCGTG GTTTACGAGC GATTCTTCGT
CAAGATCCTG ATGTGGTTAT GATTGGTGAA ATTCGAGATT TAGAAACCGC AGAAATTGCT
GTTCAAGCGT CGTTAACGGG TCACTTGGTG ATGTCTACAT TGCACACTAA CACCGCTGTT
GGTGCGATTA CTCGTCTTCG AGATATGGGC ATTGAGCCTT TTCTTATCTC ATCGTCTTTG
CTTGGCGTTC TTGCTCAGCG CTTGGTTCGA ACTCTATGTA AAGAGTGCAA GGCGCCTTAT
CAAGCGGATG ATGAACAAAA GAAATTATTC TCTTTATTAC CAGCGGATGA CTTAGTGCTT
TATAAGCCGA ATGGTTGTGA GCATTGTAAT GGCAAAGGGT ATCGTGGGCG TACTGGTATT
CATGAATTGC TTATTGTTAA TGAGAAAGTT CAGGAACTGA TTCATAAAGA AGCCGGCGAG
CAAGAGATCG AAAAAGAAGT ACGTAAAAAT ACTCGCGGTA TTCAACAAGA TGGTTTATTG
AAAGTACAAA AAGGCATTAC GACATTAGAA GAGGTGATGC GAGTCACTCG GGAAGGATAA
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| Protein sequence | MADMLFPHSV AVLRLPFSFA KRHSVVIELR PEGWVLFYVT TPSPMVLCEI RRVCKSEFSL
SQLEKEEFDT KVTQVYQRNS SEAQQLMEDI GADNDDFFSL AEELPDNDDL LESEDDAPII
KLINAMLGEA IKEGASDIHI ETFEKVLSIR FRVDGILRDV ISPSRKLAPL LVSRVKVMSK
LDIAEKRVPQ DGRISLRIGG RAVDVRVSTM PSSHGERVVM RLLDKNATRL DLHSLGMTAD
NHQKFQHIIK RPHGIILVTG PTGSGKSTTL YAGLGELDST QSNILTVEDP IEFDIDGIGQ
TQVNPKVDMT FARGLRAILR QDPDVVMIGE IRDLETAEIA VQASLTGHLV MSTLHTNTAV
GAITRLRDMG IEPFLISSSL LGVLAQRLVR TLCKECKAPY QADDEQKKLF SLLPADDLVL
YKPNGCEHCN GKGYRGRTGI HELLIVNEKV QELIHKEAGE QEIEKEVRKN TRGIQQDGLL
KVQKGITTLE EVMRVTREG
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