| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2922 |
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| Symbol | epsF |
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| ID | 6988449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 3163698 |
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| End bp | 3164915 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643381201 |
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| Product | general secretion pathway protein F |
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| Protein accession | YP_002264251 |
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| Protein GI | 209696320 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGCCT TTGAATACAA AGCCCTCGAA AAAAATGGCA AACAGAAAAA AGGCGTAATG
GAGGGCGATA ATGCTCGCCA AGTTCGCCAG CGTTTAAAAG AGCAAGGGTT AATTCCTGTT
GAAGTCATTG AAACAAAATC AAAACAGCAA AAATCCGCTT CTCAAGGGTT GAGTTTTAAG
CGCGGCATCA GTGTGAATGA TCTGTCGTTA ATTACTCGTC AACTGGCGAC GTTAGTTCAG
GCGGGTATGC CATTAGAAGA GTGTTTAAAA GCCGTTGCTG AGCAAGGTGA AAAACCGCAT
ATTCGCAGTA TGATGATGGG CGTAAGATCA AAAGTAATTG AAGGTTATCC ATTAGCTGAA
AGCTTTGGTG GATACCCTCA TGTGTTTGAT GATTTATTTT GTTCAATGGT GGCTGCGGGT
GAAAAATCGG GTCACTTAGA TACCGTATTA AATCGCTTAG CGGATTACGC TGAAAATCGT
CAAAAAATGC GCAGTAAATT ACAACAAGCG ATGATTTATC CGATCATGCT AACGTTAATT
GCTGTGGCTG TTATCTCATT CTTATTAGCG ACCGTTGTGC CTAAAATTGT CGATCAATTT
GTGCAAATGG GGCAAGGGCT TCCTGCCGTC ACAGAGATAC TTATCGCGGC CAGTAATTTT
GTTGTTCACT GGGGTGTTGT TGTGGTGGTT GTCATTGTTG CGATTATTTT TGGGATCAAA
TGGCTATTAA CGAAGCCTCA TTTACGTTTG GCGTGGGATA AAAAGATCTT ACGATTGCCT
GTGGTTGGTA AGGTGGTTCG TGGTCTAAAT ACCTCTCGTT TTGCTCGTAC TCTGTCTATT
TGTACTTCCA GTGCGATCCC TTTATTAGAT GGGATGAAAG TTGCGGCAGA CGTAATGAGT
AATAAATACT TTAAACAGCA AGTGCTTGAA GCTGCAGATA ATGTACGTGA AGGGGCAAGT
TTGCGTATTT CTTTAGAGCA AACCAAATTG TTCCCCCCAA TGATGTTACA TATGATAGCC
AGTGGTGAGC AAAGTGGAGA GTTAGAGCAA ATGCTAACGC GTTCTGCGGA TAACCAAGAC
CGAGATTTTG AATCTTTAGT GAATATGGCT TTAGGTATTT TTGAGCCATT ATTAATTGTC
TTTATGGCAG GTATTGTACT TTTCATTGTT GTTGCGACAC TTATGCCAAT AATCGAATTA
AACAATTTAG TTGGATAG
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| Protein sequence | MAAFEYKALE KNGKQKKGVM EGDNARQVRQ RLKEQGLIPV EVIETKSKQQ KSASQGLSFK
RGISVNDLSL ITRQLATLVQ AGMPLEECLK AVAEQGEKPH IRSMMMGVRS KVIEGYPLAE
SFGGYPHVFD DLFCSMVAAG EKSGHLDTVL NRLADYAENR QKMRSKLQQA MIYPIMLTLI
AVAVISFLLA TVVPKIVDQF VQMGQGLPAV TEILIAASNF VVHWGVVVVV VIVAIIFGIK
WLLTKPHLRL AWDKKILRLP VVGKVVRGLN TSRFARTLSI CTSSAIPLLD GMKVAADVMS
NKYFKQQVLE AADNVREGAS LRISLEQTKL FPPMMLHMIA SGEQSGELEQ MLTRSADNQD
RDFESLVNMA LGIFEPLLIV FMAGIVLFIV VATLMPIIEL NNLVG
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