Gene VSAL_I2919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2919 
SymbolepsI 
ID6988452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand- 
Start bp3162190 
End bp3162567 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content40% 
IMG OID643381198 
Productgeneral secretion pathway protein I 
Protein accessionYP_002264248 
Protein GI209696317 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR01707] general secretion pathway protein I
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGTA GTCATTATGT GCACTCTCGG CACAAAGGCA TGACGTTACT TGAAGTCTTA 
GTTGCCCTTG CTATTTTTGC TACCGCCGCA TTAAGTGTAT TGAGATCCGT TACTCAACAC 
ATCAATACCT TAAGCTATTT AGAAGAGAAA ACCTTTGCTT CGATGGTGCT AGATAATCAA 
ATGGCATTAA TGTTGTTAGA TAAACCACCA ACTTCGATTA AAAAAGGGAA AACAGAGCTT 
GCAGGTCAAA CGTGGTATTG GACCATTGCC CCAGTAAAAA CGACGTCTAA TATTTTAAAA 
TCAGTGGACG TATCTGTAGC AACAACCAAA GACCAAAAAT CCCCACTATT AACGGTAAGA 
ACGTATGTTG CGCCGTAG
 
Protein sequence
MKSSHYVHSR HKGMTLLEVL VALAIFATAA LSVLRSVTQH INTLSYLEEK TFASMVLDNQ 
MALMLLDKPP TSIKKGKTEL AGQTWYWTIA PVKTTSNILK SVDVSVATTK DQKSPLLTVR 
TYVAP