Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2893 |
Symbol | lexA |
ID | 6987964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 3138998 |
End bp | 3139621 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643381173 |
Product | LexA repressor |
Protein accession | YP_002264223 |
Protein GI | 209696292 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCCAC TAACGGCAAG ACAGCAAGAA GTCTTTGAGT TGATCAAAGC AAAAATTGAA GATACTGGAA TGCCACCAAC ACGTGCAGAG ATTGCTCGTG AATTAGGGTT TCGTTCTGCG AACGCGGCAG AAGAACACTT AAAAGCATTA GCTCGTAAGC AAGCGATCGA AATTATTCCA GGTGCTTCTC GTGGTATTCG TATCCTATTG CAAGATCCTG TAGAGCCTGA AGATTTAGGT CTTCCTCTTA TCGGTCAAGT AGCGGCGGGT GAGCCTATCC TTGCTCAAGA GCACGTAGAA AGTCATTATC AAGTTGATCC TAGTATGTTT AAGCCACAAG CGGATTTTTT ATTGCGCGTA AATGGCGAGA GCATGAAAAA CATCGGAATT ATGGATGGCG ACTTATTAGC GGTACATAAA ACGCAAGACG TTCATGATGG TCAAGTGGTT GTTGCTCGTG TTGATGATGA TGTTACTGTT AAGCGTTTAG AGCGTAAAGG TTCAATGGTA TTTCTTCATG CTGAAAACGA AGAGTTTGCT CCAATTCAAG TCGATCTTAC GTCTCAACAC CTTTCTATTG AAGGTATTGC TGTTGGGGTG ATCCGTAGTA CGACTTGGAT GTAA
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Protein sequence | MKPLTARQQE VFELIKAKIE DTGMPPTRAE IARELGFRSA NAAEEHLKAL ARKQAIEIIP GASRGIRILL QDPVEPEDLG LPLIGQVAAG EPILAQEHVE SHYQVDPSMF KPQADFLLRV NGESMKNIGI MDGDLLAVHK TQDVHDGQVV VARVDDDVTV KRLERKGSMV FLHAENEEFA PIQVDLTSQH LSIEGIAVGV IRSTTWM
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