| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2876 |
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| Symbol | birA |
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| ID | 6988337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 3116236 |
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| End bp | 3117195 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643381151 |
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| Product | biotin--protein ligase |
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| Protein accession | YP_002264206 |
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| Protein GI | 209696275 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
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| TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGAAC ACTTGAAAAA GCTAGAAATA TTGAAGGCGC TCAGTGATGG TTCTTTTCAT
TCAGGTGAGG ACTTAGGTGA TGACATTGGC GTATCCAGAG CTGCCATAAG CAAGCATATC
AAGGGGATTC AGGAGTGGGG ATTATCAATA TATAGAATTC AGGGTAAAGG TTATGCTTTA
TCTTCTCCTT TAGAATTACT CTCAGTAGAT CAGGTAATAT GTAAGGATCT GCCACAAACT
TCAATTCTTG GTGTTGTTGA TTCTACAAAT CAGTTCTTAT TGGACCAAAT GACTGTGCTT
AAAAAAGGGC AATCTTGCTT TGCTGAATAT CAAGTGGCAG GGCGAGGAAG GAGAGGTCGA
ACATGGGTAT CTCCATTCGG TAGTAATATC TACTGTTCTA TATTCTGGAG ATTTGATAAT
GGACTTGCCG CAACCATGGG ATTAAGTTTA GCAATTGGAA TTGCTGTTGT TGACGCCCTA
GAAGTTATTG GTTGTAAAGG CTTAAAGCTG AAATGGCCGA ATGATATTTA TTGGAATGAA
TTAAAGTTAG CAGGTGTTCT TATTGAGCTT TCCGGTCAAT CAGGAGGAAG TGCAGATGTG
GTTATTGGAA TTGGCATCAA TATAGAGTTG AATGAAAAAT CTGCTTTAGT GATTGATCAA
CCTTGGGTTG ATTTGATGAC TATATTAGGT GAAAGGAACA TCAGGAATAA GCTTGCGAGT
GAATTATTAG TATCCTTAAA TAAAACATTA CTTGAGTTTG AGCATTCGGG GCTACAGTCT
TTCATCAACC GATGGAAAGA ACTTGATAAT TTTATAGATG AAAGCATCAC GCTTACCATG
GGTAGCCAAT CTATTCATGG TGTTTGTCGA GGTATAAATT CGCAAGGTGC GATATTGCTT
GAACGTAACT GTATCGTCGA ATCTTATTTC GGTGGTGAGA TTTCAGTTAG AAAAGCGTGA
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| Protein sequence | MKEHLKKLEI LKALSDGSFH SGEDLGDDIG VSRAAISKHI KGIQEWGLSI YRIQGKGYAL
SSPLELLSVD QVICKDLPQT SILGVVDSTN QFLLDQMTVL KKGQSCFAEY QVAGRGRRGR
TWVSPFGSNI YCSIFWRFDN GLAATMGLSL AIGIAVVDAL EVIGCKGLKL KWPNDIYWNE
LKLAGVLIEL SGQSGGSADV VIGIGINIEL NEKSALVIDQ PWVDLMTILG ERNIRNKLAS
ELLVSLNKTL LEFEHSGLQS FINRWKELDN FIDESITLTM GSQSIHGVCR GINSQGAILL
ERNCIVESYF GGEISVRKA
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