| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2872b |
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| Symbol | secE |
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| ID | 6988927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 3111924 |
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| End bp | 3112301 |
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| Gene Length | 378 bp |
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| Protein Length | 125 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643381145 |
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| Product | preprotein translocase subunit SecE |
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| Protein accession | YP_002264202 |
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| Protein GI | 209696272 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0690] Preprotein translocase subunit SecE |
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| TIGRFAM ID | [TIGR00964] preprotein translocase, SecE subunit, bacterial |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00131077 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAACAA ATACTGAGAC GACAGAAACT TCAGGCGCAG TTGATACAAT AAAGTGGTTA
CTAGTTTTAG TTCTACTTTC TGCTGCGGTA ATTGGTAATT ATTTACTAGC TGATTTGTCT
GTTGTTATTC GAGCTGCCGG CGTAGTTGCA TTAATTGCTG CTGCTGGTGG TATTGCTGCC
TTCACAGCAA AAGGTCAAAC TGCAATTGAA TTTGCTCGCG AATCAAGAAT GGAAGTACGT
AAGGTTGTTT GGCCTACACG GCAAGAAACA ACACAAACAA CTTTCATTGT TCTTGCTGTA
TGTATCGTAA TGGCTCTTAT TTTATGGGGT ATTGATGGTA TTATGGTAAG ACTAATTGGC
TTAATCACAG GTGTTTGA
|
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| Protein sequence | MKTNTETTET SGAVDTIKWL LVLVLLSAAV IGNYLLADLS VVIRAAGVVA LIAAAGGIAA
FTAKGQTAIE FARESRMEVR KVVWPTRQET TQTTFIVLAV CIVMALILWG IDGIMVRLIG
LITGV
|
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