| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2864 |
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| Symbol | csgA |
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| ID | 6987953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 3099392 |
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| End bp | 3100336 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 643381137 |
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| Product | curlin associated precursor, CsgA like |
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| Protein accession | YP_002264194 |
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| Protein GI | 209696264 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.792578 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGC TAGCAATCGC AATCTCAACC ATCTTACTGT CTAGTACAGT TTATGCAGGA
AATACAGCAG ACGTAGAGTT GTTTAATGCA GATGATAATG ACGTTAATAT TTTCCAATTA
TCTCCCGCTG TTGGTAATGA CGCAGATGTG TTAATTAGAA ATTCGGATGA TAATGACGTT
GATATCTATC AAATGGGACG CCACAACGAA GCAGTAGTAC GAGCTCGTAA TGGTAGTGAT
GATAATGACC TAATGATAGA GCAAGATGGC CGTCATAATA GAGCTGTATT AAAAGCTCGT
TTTGGTAGTG ACGATAATGA TTTTTCTATT GAACAAGATG GTCGTAATAA TCTAGGTAAA
GTTATTGCTT ATGGAAGTGA TGATAACAAT GGATTAATAG ATCAACGTGG ACGAAGCAAT
AAAGCTAATA TCAACTTTGA TAATGCAGAC AATAATGCAA ATAATAAAAT TGTACAAAGA
GGCCGTCGAA ACGAAGGTGA TATAAGTATT ATGGGCGGTT CAAACAATGG AACTCTTAAA
ATTCACCAAA AAGGACGTGA TAACGATTCT ACAATTCATG TTTATGGTGG TTCAGGTAAT
GATGCATTAA CAAAAATTAA TGGTAATGAC AATACAACTT ATACTGCATT CTATGCCGGT
GCATCAGACA ATGATACGAA CATACGTATG AAAAATGATT CACTAGATAA CACGGTTTAT
GCCGTTGTTG TTGGTGGTAG CTTTAATGAA GCAGATGTAA CAATTGACGC AAGTAATGAT
AACTACCTTA CTGTCTCTCA ATGGGGTAGT GATTCTGATG CCACTCTTAC TTTGGAAAAT
GGATCAAATA ATAACTGGAT GATGATTAAT CAAACTAATA ATGATTCAGC GACTGTTATG
GCTGACAATA GTAGTAATAA CGTTGTTTTA ATCACACAGT TATAA
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| Protein sequence | MKKLAIAIST ILLSSTVYAG NTADVELFNA DDNDVNIFQL SPAVGNDADV LIRNSDDNDV
DIYQMGRHNE AVVRARNGSD DNDLMIEQDG RHNRAVLKAR FGSDDNDFSI EQDGRNNLGK
VIAYGSDDNN GLIDQRGRSN KANINFDNAD NNANNKIVQR GRRNEGDISI MGGSNNGTLK
IHQKGRDNDS TIHVYGGSGN DALTKINGND NTTYTAFYAG ASDNDTNIRM KNDSLDNTVY
AVVVGGSFNE ADVTIDASND NYLTVSQWGS DSDATLTLEN GSNNNWMMIN QTNNDSATVM
ADNSSNNVVL ITQL
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