Gene VSAL_I2851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2851 
SymbolhemE 
ID6987947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp3089204 
End bp3090271 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content42% 
IMG OID643381128 
Producturoporphyrinogen decarboxylase 
Protein accessionYP_002264185 
Protein GI209696255 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0407] Uroporphyrinogen-III decarboxylase 
TIGRFAM ID[TIGR01464] uroporphyrinogen decarboxylase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.180798 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAAT TAAAAAACGA CCGTTACCTA CGTGCGTTAT TAAAACAACC AGTAGATTAC 
ACACCAGTTT GGATGATGCG CCAAGCAGGC CGTTACCTAC CAGAATATAA AGCCACGCGT
GCAGAAGCGG GCGATTTTAT GTCTTTGTGT AAGAATGCAG GACTTGCTTC TGAAGTTACG
CTTCAGCCTT TGCGCCGTTT CCCTCTAGAT GCTGCGATTT TATTTTCAGA TATCCTGACG
ATTCCAGATG CAATGGGTCT AGGTCTGTAC TTTGAAGCTG GCGAAGGTCC TAAATTTGAA
CGTCCAATTA CGTGTAAAGC CGACGTCGAT AAAATTGGCA TTCCTGATCC TGAAGGTGAA
TTACAATACG TAATGAATGC CGTACGTCAG ATCCGTAAAG ATCTTAAAGG TGAAGTTCCA
TTGATTGGCT TCTCTGGTAG CCCGTGGACA TTGGCGACTT ACATGGTTGA AGGCGGAAGC
TCTAAAGCTT TTACTAAAAT CAAAAAAATG ATGTATGCAG AGCCTGCAAT ATTACATCTA
TTACTCGATA AATTGGCAGA TACTGTTATT GAGTACCTTA ATGCTCAAAT TAAAGCCGGT
GCACAATCGG TCATGGTATT TGATACATGG GGCGGTGTAT TAACCCCTCG TGACTATAAC
GAGTTCTCAT TACGTTATAT GCATAAAATT GTCGATGCAT TGATTCGTGA AAATGAAGGT
CGTCGTGTTC CTGTGACTCT ATTCACAAAG AATGGTGGAA TGTGGTTAGA GCAAATTGCA
GCAACAGGTT GTGATGCCAT TGGTCTGGAT TGGACAATCA ATATTGCTGA TGCGAAGAAA
CGTATTGGTG ATAAAGTTGC TCTGCAAGGT AACATGGATC CATCAATCCT TTATGCACAA
CCTGAGCGTA TTCGCCAAGA AGTTAGCACT ATTCTTGAAG GGTTTGGTAA TGAAGGAACA
GGCCACGTAT TCAATCTAGG TCATGGTATT CATCTTGATG TACCGCCTGA AAATGCGGGT
GTATTTGTTG ATGCGGTTCA TGAGTTATCA AAACCATATC ATAAATAG
 
Protein sequence
MTELKNDRYL RALLKQPVDY TPVWMMRQAG RYLPEYKATR AEAGDFMSLC KNAGLASEVT 
LQPLRRFPLD AAILFSDILT IPDAMGLGLY FEAGEGPKFE RPITCKADVD KIGIPDPEGE
LQYVMNAVRQ IRKDLKGEVP LIGFSGSPWT LATYMVEGGS SKAFTKIKKM MYAEPAILHL
LLDKLADTVI EYLNAQIKAG AQSVMVFDTW GGVLTPRDYN EFSLRYMHKI VDALIRENEG
RRVPVTLFTK NGGMWLEQIA ATGCDAIGLD WTINIADAKK RIGDKVALQG NMDPSILYAQ
PERIRQEVST ILEGFGNEGT GHVFNLGHGI HLDVPPENAG VFVDAVHELS KPYHK