| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2842 |
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| Symbol | purH |
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| ID | 6987941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 3079982 |
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| End bp | 3081574 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643381119 |
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| Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
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| Protein accession | YP_002264176 |
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| Protein GI | 209696246 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
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| TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0397824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACC CACGTCCGAT CCGTCGTGCG CTAATTAGCG TATCTGATAA AACTGGTATT
GTAGAATTTG CTCAAGCACT GACTGAACGT GGTGTAGATA TTCTATCTAC TGGCGGCACT
GCTCGCCTGC TTGCGGAAAA AAATATCCCT GTAACAGAAG TATCTGATTA CACTGGCTTC
CCAGAAATGA TGGATGGCCG CGTTAAAACT CTTCATCCTA AAGTACATGG TGGTGTTCTT
GGTCGTCGCG GTCAAGATGA TGGCATCATG GAGCAACACG GCATCAACCC AATCGATATT
GTTGTTGTTA ACCTTTATCC ATTCGCTGAA ACCGTAGCAA AAGAAGGCTG TACGCTAGCT
GATGCTGTTG AGAACATCGA TATCGGTGGT CCAACAATGG TTCGCTCTGC GGCTAAAAAC
CACAAAGACG TTACTATTGT CGTTAATGCT CACGATTACG ATCGCGTCAT TGCTGAAATG
GACACTAACG ACAAATCACT GACTCAAGCA ACGCGTTTTG ATTTAGCGAT TGCAGCATTT
GAGCACACCG CTTCTTACGA TGGCATGATC GCTAATTACT TCGGCACTAT GGTTCCTAGC
TATGGTGAGA ACAAAGAAGG CGATAACGAA TCTAAATTCC CTCGTACCTT CAACCAACAG
TTCGAGAAAA AACAAGACAT GCGCTACGGT GAGAACAGTC ATCAAGCGGC TGCATTCTAT
GTTGAAGCTA ATCCTGAAGA AGCGTCAGTA TCAACGGCTC GTCAAATCCA AGGTAAAGCC
CTTTCTTATA ACAACATTGC TGATACTGAC GCCGCTCTTG AGTGTGTGAA AGAGTTCAAC
GAACCAGCAT GTGTTATCGT TAAGCACGCA AACCCTTGTG GTGTTGCATT AGGTAAAGAC
GTTCTTGAAG CTTATCACCG TGCTTACCAA ACAGATCCTA CCTCAGCATT TGGCGGCATC
ATTGCTTTCA ACCGTGAATT AGATGCTGCG ACTGCAACAG CGATTACTGA ACGTCAATTT
GTTGAAGTGA TTATTGCCCC TTCTGTTTCT GCTGAAGCAA TTGAAATCAT AGCGGCTAAG
AAAAACCTTC GCTTACTTGA GTGTGGCGAA TGGTCAACAA AAACCACGGA ATTTGATATT
AAGCGTGTTA ACGGCGGCCT ATTGGTTCAA GACCGTGACC AAGGCATGGT ATCGGAAGAT
GAGCTTGAAG TGGTTTCTAA GCGCCAACCA ACGGCTGAAG AATTAAAAGA CGCACTGTTC
TGTTGGAAAG TAGCGAAATA CGTGAAATCT AACGCCATTG TTTACTCTAA AGGTGACATG
ACTATCGGTG TCGGCGCTGG CCAAATGAGC CGCGTGTATT CTGCAAAAAT TGCAGGTATT
AAAGCCGCGG ACGAAGGTTT AGTGGTCGAA GGTTGCGCAA TGGCATCCGA TGCGTTCTTC
CCATTCCGTG ATGGCATTGA TGCAGCGGCA GAAGCTGGCA TTAAATGTGT TATCCAACCG
GGTGGTTCAA TGCGTGATGA TGAAGTTATC GCAGCAGCAG ACGAGCATGG TATGGCGATG
ATCTTTACTG GTATGCGCCA CTTCCGCCAC TAA
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| Protein sequence | MNNPRPIRRA LISVSDKTGI VEFAQALTER GVDILSTGGT ARLLAEKNIP VTEVSDYTGF
PEMMDGRVKT LHPKVHGGVL GRRGQDDGIM EQHGINPIDI VVVNLYPFAE TVAKEGCTLA
DAVENIDIGG PTMVRSAAKN HKDVTIVVNA HDYDRVIAEM DTNDKSLTQA TRFDLAIAAF
EHTASYDGMI ANYFGTMVPS YGENKEGDNE SKFPRTFNQQ FEKKQDMRYG ENSHQAAAFY
VEANPEEASV STARQIQGKA LSYNNIADTD AALECVKEFN EPACVIVKHA NPCGVALGKD
VLEAYHRAYQ TDPTSAFGGI IAFNRELDAA TATAITERQF VEVIIAPSVS AEAIEIIAAK
KNLRLLECGE WSTKTTEFDI KRVNGGLLVQ DRDQGMVSED ELEVVSKRQP TAEELKDALF
CWKVAKYVKS NAIVYSKGDM TIGVGAGQMS RVYSAKIAGI KAADEGLVVE GCAMASDAFF
PFRDGIDAAA EAGIKCVIQP GGSMRDDEVI AAADEHGMAM IFTGMRHFRH
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