Gene VSAL_I2830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2830 
Symbol 
ID6987936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp3067539 
End bp3068720 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content43% 
IMG OID643381107 
Productputative 3-phenylpropionic acid transporter 
Protein accessionYP_002264164 
Protein GI209696234 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCCT CTTTTTTATT CCCTTTGGAC ATTGTCATGG TACGCGTTTC TCCCTTTGCT 
TGGATCTCTC AATATTTTGG AGGGTTCTTT TTTGCCTATG GTGTGTATTT GCCTTTTTGG
GCGCTGTGGT TTGCCGACCA AGGGGTATCA GCAGGAGATA TTGGTGTTTT AATTGGTTTG
GGATTTGCGA CGCGTTGTGT GGCGAACTTA GTGATCACTC CTCGCTTACA TAAAGTTGAA
TATTTAATTC CGGCCCTGCG TGCATTAACG TTTGCCTCCT TGATTGCACT TGGGTTGTTT
CTTATTAATG GCGGCAACTT CTGGTGGATG GCATTTGTCA CCGTGTTGTT TAATTTGTCC
TGTGGTCCGG CGATTCCTCT CTCCGATGCA ATGACGAATT ATTATGCGAA AAATAAATTA
TTAGATTATG GTCGAACTCG TTTATGGGGT TCAGTCAGCT TTATTGCCGG CTCAACGGTC
GTGGGTTACC TAGTGTCAGG CTTTGGCACC GACATGATTG TGTACACTGC GATTGCTGGT
ATTTTAGCGG CATTATTCTT AGTGATGCGT AATCCAAATC CAATGCCAGT GTCAGTCTCG
GAAGAAGACC AAACTCACCC TAAACTATTG GCCTTACTTC GTGAAGCTCC GGTATTAAAA
TTTATTATTT TGGTGTCGTT AATTCAAGGT AGCCATGCCG CGTATTACAG TTTCAGCTCT
ATTTATTGGA AAGCGTCAGG CTATGAAGAA AGTACCATTG GTTATTTGTG GAGCTTAGGT
GTCGTCGCTG AAGTGTTGGT GTTTGCTTTT AGTAGACAAT TGTTCGCGGG ATGGAAAGTC
TCGACTTTAT TTAAAGTGGC AGCCGTTGGT GTCATGATCC GCTGGGGATT AACGGCGGCA
ACGACAGAGT TATCGGCATT AATATTAGTT CAAGCACTGC ATGGTGTGAC CTTTGCGATG
GCACATTTGG CCGCCATTCA ATACATTCAA AAATTCCCTC AAAACAAAAT GATCCCACTA
CAAGCCTTAT ATAATGCGAT TCCGCTTGGT GCCTTTATTG CCTTAATGAC AACATTAAGT
GGTTGGGGTT ATGAAGTGTG GGGAGCGCAT ATTTTCTGGG GTATGGCAGT GATGGGTGCC
TTTGCCTTAA TGATTAAGCT GGATAAAGTA AAAGATAAAT AG
 
Protein sequence
MTASFLFPLD IVMVRVSPFA WISQYFGGFF FAYGVYLPFW ALWFADQGVS AGDIGVLIGL 
GFATRCVANL VITPRLHKVE YLIPALRALT FASLIALGLF LINGGNFWWM AFVTVLFNLS
CGPAIPLSDA MTNYYAKNKL LDYGRTRLWG SVSFIAGSTV VGYLVSGFGT DMIVYTAIAG
ILAALFLVMR NPNPMPVSVS EEDQTHPKLL ALLREAPVLK FIILVSLIQG SHAAYYSFSS
IYWKASGYEE STIGYLWSLG VVAEVLVFAF SRQLFAGWKV STLFKVAAVG VMIRWGLTAA
TTELSALILV QALHGVTFAM AHLAAIQYIQ KFPQNKMIPL QALYNAIPLG AFIALMTTLS
GWGYEVWGAH IFWGMAVMGA FALMIKLDKV KDK