Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2830 |
Symbol | |
ID | 6987936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 3067539 |
End bp | 3068720 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643381107 |
Product | putative 3-phenylpropionic acid transporter |
Protein accession | YP_002264164 |
Protein GI | 209696234 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGGCCT CTTTTTTATT CCCTTTGGAC ATTGTCATGG TACGCGTTTC TCCCTTTGCT TGGATCTCTC AATATTTTGG AGGGTTCTTT TTTGCCTATG GTGTGTATTT GCCTTTTTGG GCGCTGTGGT TTGCCGACCA AGGGGTATCA GCAGGAGATA TTGGTGTTTT AATTGGTTTG GGATTTGCGA CGCGTTGTGT GGCGAACTTA GTGATCACTC CTCGCTTACA TAAAGTTGAA TATTTAATTC CGGCCCTGCG TGCATTAACG TTTGCCTCCT TGATTGCACT TGGGTTGTTT CTTATTAATG GCGGCAACTT CTGGTGGATG GCATTTGTCA CCGTGTTGTT TAATTTGTCC TGTGGTCCGG CGATTCCTCT CTCCGATGCA ATGACGAATT ATTATGCGAA AAATAAATTA TTAGATTATG GTCGAACTCG TTTATGGGGT TCAGTCAGCT TTATTGCCGG CTCAACGGTC GTGGGTTACC TAGTGTCAGG CTTTGGCACC GACATGATTG TGTACACTGC GATTGCTGGT ATTTTAGCGG CATTATTCTT AGTGATGCGT AATCCAAATC CAATGCCAGT GTCAGTCTCG GAAGAAGACC AAACTCACCC TAAACTATTG GCCTTACTTC GTGAAGCTCC GGTATTAAAA TTTATTATTT TGGTGTCGTT AATTCAAGGT AGCCATGCCG CGTATTACAG TTTCAGCTCT ATTTATTGGA AAGCGTCAGG CTATGAAGAA AGTACCATTG GTTATTTGTG GAGCTTAGGT GTCGTCGCTG AAGTGTTGGT GTTTGCTTTT AGTAGACAAT TGTTCGCGGG ATGGAAAGTC TCGACTTTAT TTAAAGTGGC AGCCGTTGGT GTCATGATCC GCTGGGGATT AACGGCGGCA ACGACAGAGT TATCGGCATT AATATTAGTT CAAGCACTGC ATGGTGTGAC CTTTGCGATG GCACATTTGG CCGCCATTCA ATACATTCAA AAATTCCCTC AAAACAAAAT GATCCCACTA CAAGCCTTAT ATAATGCGAT TCCGCTTGGT GCCTTTATTG CCTTAATGAC AACATTAAGT GGTTGGGGTT ATGAAGTGTG GGGAGCGCAT ATTTTCTGGG GTATGGCAGT GATGGGTGCC TTTGCCTTAA TGATTAAGCT GGATAAAGTA AAAGATAAAT AG
|
Protein sequence | MTASFLFPLD IVMVRVSPFA WISQYFGGFF FAYGVYLPFW ALWFADQGVS AGDIGVLIGL GFATRCVANL VITPRLHKVE YLIPALRALT FASLIALGLF LINGGNFWWM AFVTVLFNLS CGPAIPLSDA MTNYYAKNKL LDYGRTRLWG SVSFIAGSTV VGYLVSGFGT DMIVYTAIAG ILAALFLVMR NPNPMPVSVS EEDQTHPKLL ALLREAPVLK FIILVSLIQG SHAAYYSFSS IYWKASGYEE STIGYLWSLG VVAEVLVFAF SRQLFAGWKV STLFKVAAVG VMIRWGLTAA TTELSALILV QALHGVTFAM AHLAAIQYIQ KFPQNKMIPL QALYNAIPLG AFIALMTTLS GWGYEVWGAH IFWGMAVMGA FALMIKLDKV KDK
|
| |