| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2822 |
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| Symbol | glmS |
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| ID | 6988887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 3055981 |
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| End bp | 3057813 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643381099 |
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| Product | glucosamine--fructose-6-phosphate aminotransferase |
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| Protein accession | YP_002264156 |
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| Protein GI | 209696226 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
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| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTGGAA TCGTAGGTGC TGTTGCACAA AGAGATGTTG CTGAAATATT AGTTGAAGGA
TTACGCCGTT TAGAATATCG CGGTTATGAC TCGGCTGGTG TTGCCGTTGT TGATGCAGAC
AGTAATTACA CTCGACTGCG TCGCTTAGGT AAAGTTAAGG AATTAGCGGA TGCAGTCAAT
GAATCACACG TGGTCGGCGG TACTGGTATT GCTCATACTC GTTGGGCAAC GCATGGTGAG
CCGTCTGAAG TGAACGCTCA CCCACACGTT TCCGGTGATA TTACGATTGT TCACAATGGC
ATTATTGAAA ATCACGAATC ATTACGTGCG CTATTAAAAG AACGCGGTTA TGTATTTGAA
TCTCAAACGG ATACCGAGGT TATTGCACAC TTAGTTGAGT GGGAATTACG AACGTCGGAT
TCTTTGATTG AAGCGGTACA AAAAACAGCG ACTCAACTTG ATGGTGCGTA CGGTACTGTT
GCAATGGATC GTCGTGACCC TGAACGTTTA GTTGTCGCTC GCTCTGGTAG CCCAATCGTT
ATTGGTCGTG GTGTGGGTGA AAACTTTTTA GCGTCAGATC AACTGGCGTT ATTAAACGTA
ACTCGTCGCT TTATGTACCT TGAAGAAGGG GATGTTGCTG AAATTACTCG TCGTGATGTT
CGAGTGTTTG ATGCGCATGG CGAACAAGTT GAGCGTGAAG TGACAGAATC GAACGCCGAG
CATGATGCGG GAGATAAAGG TCAATATCGT CACTTCATGC AAAAAGAAGT GTTCGAGCAG
CCAAAAGCAT TAATCAATAC CATGGAAGGT CGTATTACTC ATGACTCTGT TGTAACAGAA
AGCATTGGCG TTAATGCTGT TGAGATCCTA AATAAAGTAG AACACGTACA AATCATCGCA
TGTGGTACTT CTTACAACGC GGGAATGACG GCTCGTTATT GGTTTGAGTC ACTGGCGGGT
GTTAGTTGTG ATGTCGAAAT TGCCTCTGAG TTCCGTTACC GTAAATTTGT AACGCGTCCA
AATAGCTTAT TAATTACCTT ATCTCAATCG GGTGAAACGG CTGATACGTT AGCGGCCCTT
CGTCTAGCAA AAGAGCGTGG TTACATGGGC GCAATGACGG TGTGTAATGT TGCTGGTTCA
TCTCTTGTTC GTGAATCTGA TTTTGCCTTT ATGACGCGTG CAGGAACAGA GATTGGTGTG
GCATCGACGA AAGCCTTTAC CACTCAACTT GCGGCGTTAT TGATGTTAGT GACGGCGTTA
GGTAAACAAC AAAATCGTAT CTCAAAAGAG AAAGAGAAAG AGATTGTTGA AGCCTTGCAC
GCTTTGCCCG CTCAAATAGA AAAAGCACTG TCATTTGATA AAGAAATCGA AGCGTTAGCC
CCTGACTTTG CTGACAAGCA ACACACGCTA TTTTTAGGGC GTGGAGAGTT TTATCCAATC
GCTATGGAAG CGTCGTTGAA ATTAAAAGAG ATTTCGTACA TTCATGCGGA AGCGTATGCT
GCCGGTGAAT TAAAGCACGG TCCTTTAGCG TTGATTGATG CGGATATGCC AGTGGTAGTG
GTTGCCCCAA CCAATGATTT ATTAGAAAAA TTAAAATCAA ACGTAGAAGA AGTGCGTGCT
CGTGGTGGGT TGCTGTATGT TTTCGCGGAC GAGCAAGCGG GCTTTGAAGG CGATGAAAAC
ATGAAGATCA TTACGATGCC TCATGTTAGC GATATAACTG CACCAATCTA TTATACGGTT
CCAATGCAGT TACTTTCGTA TCATGTTGCC CTGATTAAAG GGACGGATGT CGATCAGCCA
CGTAACTTAG CAAAAGCGGT AACGGTTGAG TAA
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| Protein sequence | MCGIVGAVAQ RDVAEILVEG LRRLEYRGYD SAGVAVVDAD SNYTRLRRLG KVKELADAVN
ESHVVGGTGI AHTRWATHGE PSEVNAHPHV SGDITIVHNG IIENHESLRA LLKERGYVFE
SQTDTEVIAH LVEWELRTSD SLIEAVQKTA TQLDGAYGTV AMDRRDPERL VVARSGSPIV
IGRGVGENFL ASDQLALLNV TRRFMYLEEG DVAEITRRDV RVFDAHGEQV EREVTESNAE
HDAGDKGQYR HFMQKEVFEQ PKALINTMEG RITHDSVVTE SIGVNAVEIL NKVEHVQIIA
CGTSYNAGMT ARYWFESLAG VSCDVEIASE FRYRKFVTRP NSLLITLSQS GETADTLAAL
RLAKERGYMG AMTVCNVAGS SLVRESDFAF MTRAGTEIGV ASTKAFTTQL AALLMLVTAL
GKQQNRISKE KEKEIVEALH ALPAQIEKAL SFDKEIEALA PDFADKQHTL FLGRGEFYPI
AMEASLKLKE ISYIHAEAYA AGELKHGPLA LIDADMPVVV VAPTNDLLEK LKSNVEEVRA
RGGLLYVFAD EQAGFEGDEN MKIITMPHVS DITAPIYYTV PMQLLSYHVA LIKGTDVDQP
RNLAKAVTVE
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