Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2811 |
Symbol | dipZ |
ID | 6988394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 3042841 |
End bp | 3044715 |
Gene Length | 1875 bp |
Protein Length | 624 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643381088 |
Product | thiol:disulfide interchange protein precursor |
Protein accession | YP_002264145 |
Protein GI | 209696215 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4232] Thiol:disulfide interchange protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAATT TACTCCGATT TAGAGCCGCC CTTTTATCAT TCTTCATTTT ATTTGCGTCC TTTGCACCCC AAGCGGTTGC GGCTTTTGAT TTAACTAAAC TACAAAATCA ACAAGACTCT TCTTTTGTGA CCGTAAATGA AGCCTTCCCA TTCAACTTCA TGCAACAAGG GGATCGCGTC TATTTAGATT GGCAAGTAAA ACCTGATTAT TACTTATATC AGCAGCGTAT TTCAGTCTCA GCGCATGATG CTAACATTGC CGACTTAGTC ATGGAACAAG GCACGCCTCA TAACGATGAA TTTTTTGGTG ATGTTAATAT CTACACCAAG CCATTGACCA TCACTGTGCC ACTCATCTCA GTCGATAAAG ATGCAGAGCT AACCGTTCGT TATCAAGGGT GTGCAAAAGC AGGATTCTGT TATCCACCAG AAATCCGTAA AATCCCATTA TCCATGCTCA CAGCCTCAAG CTCAAGCTCA TACCAAAACG AAACGGCAAA TACTCATGTG GTAGCCAAAA GCGAAACCGC ACCAGTGAGC GTAGAAAAAG CGACATCACC ATCGGTAAAT AGTCTAAATA CCGCTGGTAT TCAACAACCA AAAAATCAAA CTCAACAGCA AGCGCTTGCA AGCGATCTGG GTGATGCTTG GTGGACTCCG TTTTTATTCT TAGCGTTAGG TATTGGTCTT GCGTTTACTC CTTGTGTGTT ACCTATGTAC CCTATTTTAA CGGGCATTGT TTTAGGTGGC GGTAAACTTT CTCACGGTAA AGCCTTCAAA CTGTCTTTTG TCTATGTTCA AGGCATGGCT CTTACTTACA CCTTACTTGG GTTAGTCGTT GCTTCTGCCG GTCTACAATT CCAAGCAGCA TTACAACATC CCTACGTTCT TATTGGTTTG AGTGTGATGT TTGTGCTGTT GGCACTGTCC ATGTTTGGTG TTTACACCAT TCAATTACCA AGCAGCTTAC AAACCAAATT AAACGACATC AGTAACCAAC AAAAAGGCGG TAACTTAGGT GGCGTATTTG CGATGGGTGC GATCTCTGGT TTAGTGTGCT CACCATGTAC GACTGCACCA CTGTCTGGTG CGTTACTTTA TGTAGCAAAA AGTGGGGACT TACTAACAGG CGCTGTTGCG TTGTATGCCT TAGCGATTGG TATGGGTATC CCATTAATTT TAGCCGCAGT ATTTGGTAAT AAGCTACTAC CAAAAGCAGG CGTATGGATG ACGTATGTGA AAACCCTATT TGGTTTTATT CTTCTCGCGG TTCCAGTCTT CTTATTAGAG CGAATTCTTC CTCATAACAT CACGCCATTT ATTTGGTCTG CTCTTGGGAT CGTAGCATTT GGTTGGTTAT ATCATGTCAA AGCAACGATG CCCCAATCAT GGAAAACAAG TGTTGCTGGT ATCATCGCTA TTTTAGGTAT CGTCGGCTCA GCTATTCCTG TCATCGATGC CATATCAGGG AAAACATCGA GCCAAGTTGC CACTACTCAA GCGGTAGCCT TTAAGCGCAT CTCTACTATT GATGAATTAA ACAAAGAGCT TAAGGTAGCA AAAATTCAAG GCAAGCCTGT GATGCTCGAT TTCTATGCAG ATTGGTGTGT CGCTTGTAAA GAATTTGAAA AATACACCTT TCATGATGAA AACGTTGAAC CGTTACTATC CAACTTTATT TTGTTGCAAG CCGATGTCAC CAAAAACAGC CCAGTTGATA TTGAATTATT AAAACAACTT AAGGTGTTAG GTTTGCCTAC CATAGATTTT TGGAATGCAA ATGGCGATTA TTTATCAGAC TCTCGTCTTA CGGGATTCAT GAAAGCAGAG CCGTTTATTC AGCATTTGCA ACAAAATGTG AGCTTGGTTG AATAA
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Protein sequence | MTNLLRFRAA LLSFFILFAS FAPQAVAAFD LTKLQNQQDS SFVTVNEAFP FNFMQQGDRV YLDWQVKPDY YLYQQRISVS AHDANIADLV MEQGTPHNDE FFGDVNIYTK PLTITVPLIS VDKDAELTVR YQGCAKAGFC YPPEIRKIPL SMLTASSSSS YQNETANTHV VAKSETAPVS VEKATSPSVN SLNTAGIQQP KNQTQQQALA SDLGDAWWTP FLFLALGIGL AFTPCVLPMY PILTGIVLGG GKLSHGKAFK LSFVYVQGMA LTYTLLGLVV ASAGLQFQAA LQHPYVLIGL SVMFVLLALS MFGVYTIQLP SSLQTKLNDI SNQQKGGNLG GVFAMGAISG LVCSPCTTAP LSGALLYVAK SGDLLTGAVA LYALAIGMGI PLILAAVFGN KLLPKAGVWM TYVKTLFGFI LLAVPVFLLE RILPHNITPF IWSALGIVAF GWLYHVKATM PQSWKTSVAG IIAILGIVGS AIPVIDAISG KTSSQVATTQ AVAFKRISTI DELNKELKVA KIQGKPVMLD FYADWCVACK EFEKYTFHDE NVEPLLSNFI LLQADVTKNS PVDIELLKQL KVLGLPTIDF WNANGDYLSD SRLTGFMKAE PFIQHLQQNV SLVE
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