Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2779 |
Symbol | mutL |
ID | 6988803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 3008413 |
End bp | 3010371 |
Gene Length | 1959 bp |
Protein Length | 652 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643381048 |
Product | DNA mismatch repair protein |
Protein accession | YP_002264115 |
Protein GI | 209696185 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0323] DNA mismatch repair enzyme (predicted ATPase) |
TIGRFAM ID | [TIGR00585] DNA mismatch repair protein MutL |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.841115 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAATTC AAATCTTACC CGCTCGACTG GCCAACCAAA TTGCGGCGGG TGAGGTTGTG GAACGCCCCG CTTCGGTTGT CAAAGAATTG GTTGAAAATA GTATCGATGC CGGAGCGACT CGCATCGATA TTGATATCGA AAAAGGGGGC AGTAAACTCA TTCGCATCCG TGATAATGGG TCTGGTATCC CTAAAGAAGA ACTGACATTA GCATTAAGCC GTCACGCGAC CTCAAAAATT ACGACTCTTG ATGATCTTGA AGCGATTGTC AGTTTAGGGT TTCGTGGTGA AGCTTTAGCG TCAATCAGCT CTGTTTCTCG ATTAACGCTT ACCTCACGCA CTGTTGCACA AGAAGAAGCG TGGTCTGCAC ATGCTGAAGG GCGAGATATG GAGGTTAAAT TAAAACCAGC CGCTCACCCT GTTGGGACAA CCATCGATGT TGTCGATCTA TTCTTCAATA CTCCTGCCCG TCGAAAATTT CTTCGTACCG ATAAAACTGA ATTTACTCAT ATTGATGAAT TGCTTAAGCG TATTGCATTG AGTCGATTAG ATATTACGAT CAATTTACGT CATAACGGTA AATCGGTTCG TCAATACCGA GCAGCTCAAA CGAAAATGCA AGTAGAGAAA CGTTTAGCTG CCGTATGTGG AGCGAGTTTC TTACAGCATG CATTAGAAGT TGAGTTGGAG CATGGAGACT TAATCTTTCA TGGATGGATT TCATCTCCAG AAGGTGCCCG TGCCCAAGGT GATGTTCAAT ATTGCTATGT GAATGGTCGT ATGATGAAAG ATAAGTTGAT TAATCATGCA ATTCGTCAAG GGTATGAATC AAGCCTTTCT ACGAATCAGT ATGCGGCTTA TATTTTATTT ATCGAGATAA ATCCACATGA CGTAGATGTG AATGTTCATC CAGCAAAGCA CGAGGTGAGG TTTCACCAAG CACGGTTAGT GCATGATTTT ATATACCAAG CTATTTATGG TGCTTTGCAA CAGGCAGCAT CTTTACCTGA AGTAACAACG ACATCAGATA TTGAAATGGA TAGGGAATCT TATTTTCCAC CAATGAAAGA TTATGTTCGT CAGTCTTCTC TGCCACTAAC TGATGCTCAT ATTGAGAACA AATCGAAGCA ATTGAAAGAA GCAATCGAAG CAACACCGAG TTACCCAAAT AAAGCGTCTT CAGATGAGTG GGTATCTAAA GCAAAACCAT CAATGCCTAA AGCGTATCAA AGTGAAAAAC CGTCCCAAAG AGAATTGAAT AACTACCAAC ATTTATTAAC AACGCGAGAT CGTGAAGACA AAACATCTAA TTTTGAAGTT AATGAAGTAC GGATCCCTAA GATTTCAGAG GCTAAACATA ACACTGTTGT TGTGCCTCAA TTGAAAAGTG CGGTGTCGAC TTCTATGCTA TTAGGGAAAG TGTTAAGTGT TGTTGATAAG GTGTTTGGGC TGCTTCAATT AGGTAATCAA TTGCAATTGG TTGATCTACG CTATGCTGAA TTTATCAAAA GTTATGGCCA ATTAAACTCG GCTCATCATG AAGTGTTAAA AGCTCAGCCG TTATTGATTC CATTATCGAT AGGGATTGAT AAAGATATTT GTAACAAACT CACAGAGTAT CAAGGTATAT TGAAACAACT TGGTATTGAT CTTAAAGTGA AAAATAATGA AAGTTTGATA GTTATGGCGG TTTGTCAGCC TATCAGGCAA CAGAATTTAC AACAATTGAT CCCGAATCTG TTAAGGTATA TTTATCAGAT TAATCCATCG TTGGATCAAG TGATTAGCTG GCTTTCTCAT CAAGTACAAC ATGATGAAGC GTGCTATAGC TCAGCACAAG CAATACAACT TGTGATGGAA TTAGAGCAGT TGTGGGGTAA TGAATTATCT CAATTTAATA ATAAACTGCT AAAAAACATA GATATTACTC AGGCGATACA AGCATTTAGT CATGAATAA
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Protein sequence | MPIQILPARL ANQIAAGEVV ERPASVVKEL VENSIDAGAT RIDIDIEKGG SKLIRIRDNG SGIPKEELTL ALSRHATSKI TTLDDLEAIV SLGFRGEALA SISSVSRLTL TSRTVAQEEA WSAHAEGRDM EVKLKPAAHP VGTTIDVVDL FFNTPARRKF LRTDKTEFTH IDELLKRIAL SRLDITINLR HNGKSVRQYR AAQTKMQVEK RLAAVCGASF LQHALEVELE HGDLIFHGWI SSPEGARAQG DVQYCYVNGR MMKDKLINHA IRQGYESSLS TNQYAAYILF IEINPHDVDV NVHPAKHEVR FHQARLVHDF IYQAIYGALQ QAASLPEVTT TSDIEMDRES YFPPMKDYVR QSSLPLTDAH IENKSKQLKE AIEATPSYPN KASSDEWVSK AKPSMPKAYQ SEKPSQRELN NYQHLLTTRD REDKTSNFEV NEVRIPKISE AKHNTVVVPQ LKSAVSTSML LGKVLSVVDK VFGLLQLGNQ LQLVDLRYAE FIKSYGQLNS AHHEVLKAQP LLIPLSIGID KDICNKLTEY QGILKQLGID LKVKNNESLI VMAVCQPIRQ QNLQQLIPNL LRYIYQINPS LDQVISWLSH QVQHDEACYS SAQAIQLVME LEQLWGNELS QFNNKLLKNI DITQAIQAFS HE
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