Gene VSAL_I2771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2771 
SymbolmotX 
ID6988674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand- 
Start bp3000998 
End bp3001630 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content43% 
IMG OID643381040 
Productsodium-type polar flagellar protein MotX 
Protein accessionYP_002264107 
Protein GI209696177 
COG category[R] General function prediction only 
COG ID[COG0790] FOG: TPR repeat, SEL1 subfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAC GACATCTCGT CGTTGCGTGT ATGGTGGCTT TAGCGCCAAC GCATGCATCG 
ACTAAAGAGA TCGGAGAACC GGTCCCGATC TATACCGAAG ATCAATTATT TAGATTATTT 
GATACGAATT CACATTTAAC GCGAGTTCAA AAAGTAGATA ATTGCCAACT AGTTGAAGAT 
ATTGTCGCCC GTGCAACAAA AATAGATTCT CCAGCTTATG AATTCTTGTA TGGAGATATG 
TTGGCGTGGG GGGTTTGTGT TGACCGTGAT GTAGAGCTTG GCCTCTATTA TATGGAAAAC 
GCAGCCAGAC AAGGGTTACC TGCCGCATTA GAGCAAATTG GACGATACTA CTCTAAAGGC 
ACCTTAGTTC AGCAAGACAG AGAAAGAGCG ATACCTTACT TACGTGAAGC CGCTGCAATG 
GGAAATCTTA ATGCCCGTAT TAGTTTAGCT GAGTTGCTTT TGAGTGATTA TGGAAGTCCA 
TTAGACTATG AAGATGCGTA TCGATGGTTA TACAATTCGG TTACGTCAGA TGGGCGCAAA 
CACCAACGCA TTGCTAATCT TCGTGATGGG TTAGAAATGC GAATGCCAGG AAATATCATT 
GCTAGAGCAA AGCGTCGAGA TACGTTCTGG TAA
 
Protein sequence
MKLRHLVVAC MVALAPTHAS TKEIGEPVPI YTEDQLFRLF DTNSHLTRVQ KVDNCQLVED 
IVARATKIDS PAYEFLYGDM LAWGVCVDRD VELGLYYMEN AARQGLPAAL EQIGRYYSKG 
TLVQQDRERA IPYLREAAAM GNLNARISLA ELLLSDYGSP LDYEDAYRWL YNSVTSDGRK 
HQRIANLRDG LEMRMPGNII ARAKRRDTFW