| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2762 |
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| Symbol | metF |
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| ID | 6987911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2992910 |
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| End bp | 2993806 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643381031 |
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| Product | 5,10-methylenetetrahydrofolate reductase |
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| Protein accession | YP_002264098 |
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| Protein GI | 209696168 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0685] 5,10-methylenetetrahydrofolate reductase |
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| TIGRFAM ID | [TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCTATT CACACGCAAG CCACTTAGAG TCGTTAAATC AAAATATTGC AGAGCTTAAT
GGCTGTATCA ATGTATCTTT TGAGTTTTTT CCACCAAGTT CAGAGAAGAT GGAAGAAACG
CTCTGGAACT CAATTCATCG TTTAAAAACA CTAAAACCAA AATTTGTGTC TGTAACGTAT
GGGGCTAACT CTGGTGAACG TGATCGTACC CATTCCATTA TTAAAGAAAT TAAAGAGCAA
ACGGGTCTTA TTGCTGCTCC GCATTTAACG TGTATTGATG CGAGCCGTTC AGAGTTAATC
GACATTGCGA ATGATTACTG GGCAAATGGT ATTAAAGATA TTGTTGCATT GCGTGGTGAT
ATTCCAGCGG GTGGTGGTGC ACCAGATATG TATGCTTCAG ATTTGGTTGA GTTACTAAAA
TCACAACATG ATTTTGATAT TTCAGTGGCT GCATTTCCTG AAGTACATCC AGAAGCCAAA
AGCGCACAAG CGGATTTATT AAACCTAAAA CGTAAAGTAG ATGCGGGTGC TAACCGTGCG
ATTACTCAGT TTTTCTTTGA TGTGGAAAGC TATTTACGTT TCCGTGATCG CTGTGTTTCT
GCGGGCATTG ATGTTGAAAT TATTCCAGGT ATTTTACCCG TTTCAAATTT CAAGCAAGCC
TCACGTTTTG CTAAAATGAA TAACGTAAGA ATCCCAGGTT GGATGGCTCA GCAATTTGAA
GGCTTGGATG ATGATCCTGT GACTCGTCAA ATGGTTGGGG CAAGTCACGC GATTGATATG
ACGCGAATTT TAAGTCGTGA AGGCGTAAAA GATTTTCACT TCTATACGTT AAATCGTGCA
GAACATACTT ATGCTCTTTG TCATACATTA GGGGTTCGTC CTGACGTTAA TCGTTAA
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| Protein sequence | MAYSHASHLE SLNQNIAELN GCINVSFEFF PPSSEKMEET LWNSIHRLKT LKPKFVSVTY
GANSGERDRT HSIIKEIKEQ TGLIAAPHLT CIDASRSELI DIANDYWANG IKDIVALRGD
IPAGGGAPDM YASDLVELLK SQHDFDISVA AFPEVHPEAK SAQADLLNLK RKVDAGANRA
ITQFFFDVES YLRFRDRCVS AGIDVEIIPG ILPVSNFKQA SRFAKMNNVR IPGWMAQQFE
GLDDDPVTRQ MVGASHAIDM TRILSREGVK DFHFYTLNRA EHTYALCHTL GVRPDVNR
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