Gene VSAL_I2747 details

Gene Information

• Locus tag: VSAL_I2747
• Symbol: metB
• ID: 6988796
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 2973481
• End bp: 2974647
• Gene Length: 1167 bp
• Protein Length: 388 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 643381016
• Product: cystathionine gamma-synthase
• Protein accession: YP_002264083
• Protein GI: 209696153
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases
• TIGRFAM ID: [TIGR02080] O-succinylhomoserine (thiol)-lyase

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGAGA GAAAACCTGC AACTATTGCT GTTCGTACTG GCATTGAAAC CGATTCACAA 
CACAATGCGG TTGTGCCTCC TATCTATTTA TCGACTAATT ATAGCTTTCC AGAATTTGGA 
GATGTTCCAA CGTACGATTA CGCTCGCTCA GGGAATCCAA CCCGAACTCA ATTAGAAACA 
ACATTGTCTG ATTTAGAGTG TGGTGCGGGG GCGGTGGTGA CGAACTGTGG CACTGCGGCT 
CTTAATTTAA TGGTATCAGC CTTGCTTGGT CCTGATGATT TAATTGTTGC CCCTCATGAC 
TGCTATGGCG GCACTTATCG ACTCTTTAAC ACCAGAGCAA ATAAAGGTGA TTTTCAAACG 
TTGTTTGTGG ATCAGTCTAA TGCCGCCGCT TTAGATGAAG CGCTTGCTAA AAAGCCAAAA 
CTGATCTTAT TAGAAACGCC TTCCAATCCA TTAGTTCGCG TAGTCGATAT TGCCGAAATT 
TGTAAAAAAG CGGCAGAAGT CGGTGCATTA GTTGCGGTTG ATAACACGTT CCTTTCTCCT 
GTATTACAGC AGCCACTGAC TCTTGGGGCT GATTTCGTTC TTCATTCCAC AACAAAATAC 
ATTAATGGGC ATTCAGACGT TGTTGGTGGT GTGATCATAT CTAAAACGAA AGAACATGCC 
GATGAATTGG CATGGTGGGG GAACTGCATT GGTGCAACAG GTACTGCATT TGATAGCTAT 
TTAACCCTGC GAGGAATTCG TACTCTTAGT GCTCGTATGC GAGTGCATGA AGAAAATGCG 
ATGGAAGTAT TAAAATGCTT ACAACAGCAA GAGTTAGTGG GAACGATCTA TCACCCTAGT 
CTACCTGAGC ACCCAGGGCA TGAAATAGCA AAGCGTCAGC AAGCGGGTTT TGGTGCAATG 
CTGAGTTTTG AATTAAACGG TTCGTTAGAC CAACTTAAAG TTTTTGTGAA AGCGTTAAAA 
TATTTCTCTT TAGCTGAATC GTTAGGAGGA GTAGAAAGTC TGATTGCTCA TCCGGGAACG 
ATGACACATA GAGCGATGTC AGATGAAGCT CAGGCTGCTG CCGGTTTGGT GCCGACGTTA 
TTACGTATTT CTGTTGGCCT AGAAGACAGT AGAGATTTAA TCGCAGATCT TACACAAGCG 
TTTGCTGTGG CTGCAGAGGT GAAATAA 

 

Protein sequence

MSERKPATIA VRTGIETDSQ HNAVVPPIYL STNYSFPEFG DVPTYDYARS GNPTRTQLET 
TLSDLECGAG AVVTNCGTAA LNLMVSALLG PDDLIVAPHD CYGGTYRLFN TRANKGDFQT 
LFVDQSNAAA LDEALAKKPK LILLETPSNP LVRVVDIAEI CKKAAEVGAL VAVDNTFLSP 
VLQQPLTLGA DFVLHSTTKY INGHSDVVGG VIISKTKEHA DELAWWGNCI GATGTAFDSY 
LTLRGIRTLS ARMRVHEENA MEVLKCLQQQ ELVGTIYHPS LPEHPGHEIA KRQQAGFGAM 
LSFELNGSLD QLKVFVKALK YFSLAESLGG VESLIAHPGT MTHRAMSDEA QAAAGLVPTL 
LRISVGLEDS RDLIADLTQA FAVAAEVK