| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2740 |
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| Symbol | hslV |
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| ID | 6988686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2965816 |
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| End bp | 2966346 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643381009 |
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| Product | ATP-dependent protease peptidase subunit |
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| Protein accession | YP_002264076 |
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| Protein GI | 209696146 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTACAA TTGTTTCTGT TCGCCGTGAA GGCAAAGTCG TTATTGCTGG TGATGGCCAA
GCATCTCAAG GCGATATGAT CGCTAAAGGC AACGTAAAAA AAGTTCGTCG TTTATATAAC
GATTCTGTAC TCGTTGGATT CGCAGGCAGC ACCGCAGATG CCTTCATTTT GTTCGACCTA
TGTGAACGAA AATTAGAAAT GCACCAAGGT AATTTAACGA AAGCCGCCGT TGAACTAGCA
AAAGATTGGC GTAGTGATCG TAATTTACGT CGTCTTGAAG CCATGCTAAT TGTTGCCGAT
GACACTACCT CACTGATCAT CAGTGGTACT GGTGACTTAA TCAATGCAGA TAATGACCTC
CTCACTATTG GTTCTGGTGG TTATTTTGCT CGTTCTGCGG CAACCGCATT ATTAGAAAAT
ACAGATTTAG ATGCATACGA TATTGCAGTG AAAGCACTGA CTATCGCTGG TGATACTGAT
GTATACACCA ATCATAACCA TACCGTTGAA GTTCTTGATA CCAACAAATA G
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| Protein sequence | MTTIVSVRRE GKVVIAGDGQ ASQGDMIAKG NVKKVRRLYN DSVLVGFAGS TADAFILFDL
CERKLEMHQG NLTKAAVELA KDWRSDRNLR RLEAMLIVAD DTTSLIISGT GDLINADNDL
LTIGSGGYFA RSAATALLEN TDLDAYDIAV KALTIAGDTD VYTNHNHTVE VLDTNK
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