| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2735 |
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| Symbol | astD |
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| ID | 6988275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2960768 |
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| End bp | 2962225 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643381004 |
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| Product | succinylglutamic semialdehyde dehydrogenase |
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| Protein accession | YP_002264071 |
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| Protein GI | 209696141 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR03240] succinylglutamic semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACATT GGATTGCAGG GGATTGGGTT TCTGGCCACG GTGAAACAAT ACAATCATTA
AGCCCATACA ACAGCAACGT TGTATGGCAG GGAGAAAGCG CAACCAAAGA TCAAGTTGAG
TCTGCGGTTA GTGCGGCACG ACATGCCTTT ATTGAGTGGA AAAAGCAGCC TTTCGAAGCG
CGCCAAGTGA TTATTGAGCG TTTTGCAGCG TTAGTGAAAG AGAACACGGA TAAGATTGCT
GAAGTCATTT CTAAAGAGAC TGGAAAGCCT TTTTGGGAAA CAAAAACAGA AGCGGGCGCG
ATGGTAGGTA AAATTGCTAT CTCTATACGT GCGTATCATG AAAGAACGCC CCATAAAGAG
CGTGAAGCGG CGGGAAATAA AATAGTACTC AGACATCGCC CATTAGGTGT AATGGCGGTC
TTTGGACCGT ACAACTTCCC TGGTCACCTC CCTAATGGCC ATATCGTTCC TGCATTGCTT
GCGGGTAACA CGGTGGTATT AAAACCATCA GAGCAAACGC CGTGGACCAG TGAAGTCATT
ATGAAGTTAT GGCAACAAGC GGGTTTGCCA AATGGGGTGA TTAATTTGGT GCAAGGCGCT
CGTGAAACTG GTGAAGCGTT AGCGAGTGCC AAAGGTATTG ATGGTTTGCT GTTTACTGGC
AGTGCCAATA CGGGGCATAT CCTGCATCGT CAATTTTCTG GTGATACCGG GAAAATGCTC
GCTCTAGAAA TGGGTGGCAA TAATCCAATG GTTATTTCCA AGTCCTTTGG TGAGCAAGAG
GCCGCAGTTT ATACGATTAT TCAGTCGGCA TTTATTAGTG CAGGCCAGCG TTGTACTTGT
GCCCGTCGTT TGTATGTTCC TATAGGTAAG GCGGGAGATG AGTTATTAGT TCGTCTTGTT
GAAGTGGCAA AAACCATCGT GGTTGATCAA CCTTTTGCCG AGAATACGCC ATTTATGGGA
CCACAAATCT CAATCGCAGC AGCAGAGTTT ATTCTCAACG CTCAGAAGAA TTTACAAGAT
TTAGGTGGGG AGTCTCTACT TGAAGCTAAA AGCCTAGGTC ACGCCTTTGT TTCTCCGGGG
ATTATCGATG CTACTAACGT TGCTGAATTA CCCGATGAAG AATACTTTGG ACCATTGCTA
CAAGTCGTGC GTTACGAGAC ATTAGAAGAA GCGGTAGAGC TTGCTAATGA CACTCGCTAT
GGTTTATCTG CGGGTCTAGT ATCGACGGAT GACAGTGAGT GGGAATACTT TGTAGAACAC
ATTCGTGCAG GTATCGTTAA TCGCAACCGT CAATTGACAG GTGCGAGTGG TGATGCGCCA
TTTGGTGGCC CAGGTGCATC GGGTAATATG AAGCCGAGTG CGTATTATGC GGCAGATTAT
TGTGCTTATC CAATGGCATC GATGGAAGGT GATGCGTGTG AAATTCCTGC ACAATTATCT
CCAGGACTAA CTCTTTAA
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| Protein sequence | MTHWIAGDWV SGHGETIQSL SPYNSNVVWQ GESATKDQVE SAVSAARHAF IEWKKQPFEA
RQVIIERFAA LVKENTDKIA EVISKETGKP FWETKTEAGA MVGKIAISIR AYHERTPHKE
REAAGNKIVL RHRPLGVMAV FGPYNFPGHL PNGHIVPALL AGNTVVLKPS EQTPWTSEVI
MKLWQQAGLP NGVINLVQGA RETGEALASA KGIDGLLFTG SANTGHILHR QFSGDTGKML
ALEMGGNNPM VISKSFGEQE AAVYTIIQSA FISAGQRCTC ARRLYVPIGK AGDELLVRLV
EVAKTIVVDQ PFAENTPFMG PQISIAAAEF ILNAQKNLQD LGGESLLEAK SLGHAFVSPG
IIDATNVAEL PDEEYFGPLL QVVRYETLEE AVELANDTRY GLSAGLVSTD DSEWEYFVEH
IRAGIVNRNR QLTGASGDAP FGGPGASGNM KPSAYYAADY CAYPMASMEG DACEIPAQLS
PGLTL
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