Gene VSAL_I2723 details

Gene Information

• Locus tag: VSAL_I2723
• Symbol: aroB
• ID: 6988264
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 2948918
• End bp: 2950006
• Gene Length: 1089 bp
• Protein Length: 362 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 643380992
• Product: 3-dehydroquinate synthase
• Protein accession: YP_002264059
• Protein GI: 209696129
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0337] 3-dehydroquinate synthetase
• TIGRFAM ID: [TIGR01357] 3-dehydroquinate synthase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAACGA TTCATGTAGA TTTAGCAGAA CGTAGCTATC CCATCTCTAT CGGCGCCGAG 
TTGTTTTGCA ACCCGGCGCA TTTTTCATCT GTAATACCTG CCAAAAAACG TGTTGTCGTT 
ATTAGTAATG TAACGGTTGC GCCGTTGTAT GCTCAACAAA TCATCGACAC TTTAAATACG 
TTTGAATGCC AAGTATCACT GCTTGAATTA GACGATGGCG AACAATATAA AAATCTTGAT 
ACTTTCAATC AAATCCTGAC GTTCTTATTA GAAGAAAATC ACAGCCGAGA CGTGACTATT 
GTTGCATTAG GCGGTGGTGT TGTTGGTGAT GTGGTTGGTT TTGCCTCTGC GTGTTATCAG 
CGTGGTGTCG ATTTTATTCA AGTTCCAACG ACGTTATTGT CCCAAGTGGA TTCATCCGTT 
GGTGGAAAAA CAGCAATAAA CCATCCACTA GGTAAAAATA TGGTGGGTGC CTTTTATCAA 
CCTAAAGCGG TTATTATTGA TATTAATTGT CTTAAGACGT TACCTGAACG CGAATTTGCA 
GCGGGCATGG CTGAAGTCAT TAAATATGGC ATTATTATTG ATAGTGATTT CTTTGATTGG 
CTTGATGAGA ACATGGAAAA ACTCTATGCA CTCGATCACG ATGCATTGGT GTATGCCATT 
TCACGTTGTT GCCAAATCAA AGCGGATGTT GTGGCTAAAG ATGAAAAAGA ATCAGGCGTT 
CGCGCACTTT TGAATTTAGG ACATACTTTT GGCCATGCGA TAGAGGCCGA AATGGGTTAC 
GGTAATTGGC TTCATGGTGA GGCCGTGTCT GCTGGAACCG TAATGGCTGC AGTGACAGCT 
CAAAAAGAAG GCTTAATTTC ACAGCAAGAA GTGGATCGCA TTTGTGCTCT ACTTAAAAAA 
GCGAAATTAC CTTTGAAAGC ACCTAAAGAA ATGACGGTAG AGGCATTTAT GAAGCACATG 
ATGCGTGACA AGAAAGTATT GTCAGGCAAG TTACGTTTGG TACTCCCAAC TTCAATTGGT 
AGCTCTGAGG TCGTAACAGG TGTTTCTGAG CGTGTTCTCG CTGATGTGAT AGAGCAATGT 
AAGGCATAA 

 

Protein sequence

METIHVDLAE RSYPISIGAE LFCNPAHFSS VIPAKKRVVV ISNVTVAPLY AQQIIDTLNT 
FECQVSLLEL DDGEQYKNLD TFNQILTFLL EENHSRDVTI VALGGGVVGD VVGFASACYQ 
RGVDFIQVPT TLLSQVDSSV GGKTAINHPL GKNMVGAFYQ PKAVIIDINC LKTLPEREFA 
AGMAEVIKYG IIIDSDFFDW LDENMEKLYA LDHDALVYAI SRCCQIKADV VAKDEKESGV 
RALLNLGHTF GHAIEAEMGY GNWLHGEAVS AGTVMAAVTA QKEGLISQQE VDRICALLKK 
AKLPLKAPKE MTVEAFMKHM MRDKKVLSGK LRLVLPTSIG SSEVVTGVSE RVLADVIEQC 
KA