Gene VSAL_I2719 details

Gene Information

• Locus tag: VSAL_I2719
• Symbol: pilP
• ID: 6988982
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 2944863
• End bp: 2945381
• Gene Length: 519 bp
• Protein Length: 172 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 643380989
• Product: fimbrial assembly protein PilP
• Protein accession: YP_002264056
• Protein GI: 209696126
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3168] Tfp pilus assembly protein PilP

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAGGC CATTATTCGT TATGCTCACT TTTCTTTTCG TGATAATAGG GTGCAAAGCA 
AACAAAGAGC CATTAAATGA CTTTTATGTA GAGGCCAAAT TACAAGGCAG TAAAGAGGTT 
GAAGTATTAG CTGGCGTGCT TCCTTTTGAA GTCGATTCCT ATAATAGGGC TGATGAACGT 
TCTCCTTTTG TTTTACCTAA ATTACCAGAG AAAGTCAGTC AGCCAATCGC TAAGAAATCA 
TGCTGGCAAC CAGCATACAG AAAGAAAACC GGCAGTTTAG AGCGCTATTC ATTACGGAAA 
TTACGTCTTA AAGGTGTTAT GGGAAGTGAA AATGACATTA CTGCGTTAAT ACAAACACCA 
AAAGGTGGGG TTATAAAAAT TCGAAAAGGA CAATTTATGG GCATGAATAA TGGTCAAGTT 
GTCGATATCC AATCAAAACA AATCACGCTA AAAGAAACGC TGTCTGATGG GATGGGGTGT 
TGGCAAAAAC GGTACATAAA ATTAGCGTTA AACCATTAA 

 

Protein sequence

MNRPLFVMLT FLFVIIGCKA NKEPLNDFYV EAKLQGSKEV EVLAGVLPFE VDSYNRADER 
SPFVLPKLPE KVSQPIAKKS CWQPAYRKKT GSLERYSLRK LRLKGVMGSE NDITALIQTP 
KGGVIKIRKG QFMGMNNGQV VDIQSKQITL KETLSDGMGC WQKRYIKLAL NH