| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2718 |
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| Symbol | pilO |
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| ID | 6988981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2944289 |
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| End bp | 2944870 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643380988 |
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| Product | fimbrial assembly protein PilO |
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| Protein accession | YP_002264055 |
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| Protein GI | 209696125 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3167] Tfp pilus assembly protein PilO |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTGATT GGCGTGAGTT AGATATAGAT GAAATTACTG AGTGGCCATT GTTACCTCAG
TTACTTGTCG TGTTTTTACT GTGCCTATGT GTGCATGCCG CAGGGTATTG GTTTTGGTTA
TCACCGATTC ACGAAAAAAC AGAGCAATTA AAGAGAGACG AATTAACGTT AAAAACAACC
ATCAAATATA AATACAATCA AGTCGCGGCA ATGCCTGAAA TGGAAGATCA ATTAAATGAA
TTGAATTTAC GTTATGAATT TTTAGCGCAG CAGCTTCCTG CGCAAAAAGA ACTAGCGAGT
ATGTTGTCAG GGATCAATCA AGTCGGAATT CAAAACAAAC TTACGTTTAC TCGTATTGAT
TGGGGAGAAA AACAGAATCA AGAATTTCTA TATAAACTGC CTCTAAATAT CGAACTAACG
GGGCAATATC ATGATATCGG ATCATTTTCA GAAGCAATTG CTGATCTCCC TCGAATTGTA
AGTTTGGAGA ATATTGATAT TCAACGAGTG AGTAAAGAGA GCAGTACATT GCACTTTCGA
GTAATGGCTT ATACCTATCA ATTTAGGGGG ATCCATGAAT AG
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| Protein sequence | MIDWRELDID EITEWPLLPQ LLVVFLLCLC VHAAGYWFWL SPIHEKTEQL KRDELTLKTT
IKYKYNQVAA MPEMEDQLNE LNLRYEFLAQ QLPAQKELAS MLSGINQVGI QNKLTFTRID
WGEKQNQEFL YKLPLNIELT GQYHDIGSFS EAIADLPRIV SLENIDIQRV SKESSTLHFR
VMAYTYQFRG IHE
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