| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2717 |
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| Symbol | pilN |
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| ID | 6988980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2943727 |
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| End bp | 2944296 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643380987 |
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| Product | fimbrial assembly protein PilN |
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| Protein accession | YP_002264054 |
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| Protein GI | 209696124 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3166] Tfp pilus assembly protein PilN |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTTACG AGATAAACTT GCTGTCTTGG CGAGATGAAA AAAGGCTTAA ATATAAACAA
CGGTTTATAG CGATATTAGT CTTGGCGGTT ATTCTTTCGG TTTGTTTGCA GTGGGGTTTT
GCTCGGTATT TGAATCATCA AGCTTCATTG CAAGATTCGC GTAATAACTC ATTAACTACC
CACGTTACTT GGCTTAATAG TGAACTGAAG GGATTGGCAG AAATAGGAAA GCAGCATGAG
GCTATTTTGA CTCGCTTAAA AGTTGTCGAG AATCTGCAGC AAAATAGAAA TAAAACAACG
CAAATTCTTA ATATATTACC GGAAGTGATT ACTGAAGGTG TCTATTTAAA CAAAATTAGA
ATGGATGCTC GCAGTATTGA AATGAAAGGG TTTAGTGACA GTAATGCTCG ATTGGCGACG
ATGCTGGATA AATTGGAACG GTCCACGCAG ATTGTTGATG TCGAAATGCA TTCGATTGTT
TCTGGGCAAA CGATGTTTGG GCATGAAATG AGTCGTTTTG ACGTGTCCTT TCGATTATTA
GCCCCAAAGA AGAGGGTCAA TAATGATTGA
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| Protein sequence | MAYEINLLSW RDEKRLKYKQ RFIAILVLAV ILSVCLQWGF ARYLNHQASL QDSRNNSLTT
HVTWLNSELK GLAEIGKQHE AILTRLKVVE NLQQNRNKTT QILNILPEVI TEGVYLNKIR
MDARSIEMKG FSDSNARLAT MLDKLERSTQ IVDVEMHSIV SGQTMFGHEM SRFDVSFRLL
APKKRVNND
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