| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2716 |
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| Symbol | pilM |
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| ID | 6988828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2942744 |
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| End bp | 2943742 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643380986 |
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| Product | fimbrial assembly protein PilM |
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| Protein accession | YP_002264053 |
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| Protein GI | 209696123 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTATC CTACAGTCAC TGGTGTAGAC ATAGGGCATC ATAGCATTAA AGCGGCGTCT
ATAAGGTTAA AAAAAGGTCA ATTTGAACTG ATTGCTTGTC ATGAAGTGTT ATTACCTGAC
TCTGTTTTTA TTGATACGAA CTCAGTAAAC CTCGAAGAGT TAACGCCATA TCTGACTCGT
TTAAAAAAAA TGCTCTCATT TAATCAAAAG CGTATCGCTT TTTCTGTACC TGATAGCAAC
ATTATCAGCA AGGTCATACA GATAGACAGT CAGCTTGATG AAAAAGAAAC AGAGTTTGCG
ATTGCGCATA CTTTTAACCA GCAGTCCTCT TTTTCTGTGG AAGATCTTAA TTTAGATTAT
GTCGCGTTAA ATCAACGAGG GGTAAGCAGC GTTAAAACAA CCACATATCA AGTGTTTGCT
ACACGTAAGG ATCTCATCGA ATCTCGTCAA TTATGTTTCT CTTCTGGAGG ATTAACCCCC
GTTTTAGCCG ATGCTCATTC ACATTCGTTA TTCGCACTGT GGAAGAAGGC AACGGAATCC
TATCCGAATA AAAAAAACTG GATGTTAATT GATATTGGGC ACGCTCAAAC TATTTTTTGT
GTGATGTCAC CGAATCATAA CTTTTACTCT AAAAATATTA TGTTTGGAGC GCAAGATTTA
CAGAGTAAAG ACGAACAAGA AACCAGTGAA AGTATTAGTT TTGAACATGA TACGAAGTTT
ATTGCTCAAC TTTCTGAGCA TATTAAACGG CAAGTCACAC TCTATTCATC GATCCATCAC
CATAAAATTG AAGGTTTGTG GGTTGTCGGT GGTGGAGCAC TGTTACCTGG CTTGTCGGAC
TGTCTAAGTT ATGAAGTCTC TCTCCCAACA ATGGAATTAA ATGTATCGTC TCTTTTTTTT
CAAGATAAAA AACGAGTGAT GCCAATGGCT GTCAATGCAA GTCAATATGC GGTTGCTTTA
GGTCTGGCGT TGAGAGGGGT GTCATGGCTT ACGAGATAA
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| Protein sequence | MIYPTVTGVD IGHHSIKAAS IRLKKGQFEL IACHEVLLPD SVFIDTNSVN LEELTPYLTR
LKKMLSFNQK RIAFSVPDSN IISKVIQIDS QLDEKETEFA IAHTFNQQSS FSVEDLNLDY
VALNQRGVSS VKTTTYQVFA TRKDLIESRQ LCFSSGGLTP VLADAHSHSL FALWKKATES
YPNKKNWMLI DIGHAQTIFC VMSPNHNFYS KNIMFGAQDL QSKDEQETSE SISFEHDTKF
IAQLSEHIKR QVTLYSSIHH HKIEGLWVVG GGALLPGLSD CLSYEVSLPT MELNVSSLFF
QDKKRVMPMA VNASQYAVAL GLALRGVSWL TR
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