| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2694 |
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| Symbol | gcp |
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| ID | 6987883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2915221 |
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| End bp | 2916237 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643380964 |
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| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
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| Protein accession | YP_002264032 |
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| Protein GI | 209696102 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000836704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAATTT TAGGTATTGA AACCTCGTGT GATGAAACGG GTGTGGCTAT TTATGATGAC
GAAAAAGGGC TATTGGCTCA TCAGCTGTAC AGCCAAGTTA AGTTACACGC AGATTATGGT
GGTGTAGTAC CTGAATTAGC GTCTCGTGAT CATGTTAAAA AAACAATTCC ACTGATTCAA
GCGGCATTAA ATGATGCTGG CATGACAAAA GATGATATTG ATGGTATTGC GTATACCGCT
GGCCCTGGTT TGGTTGGTGC GTTATTGGTT GGTTCAACTA TTGGTCGTAG CATTGCGTAC
GCATGGGATG TACCTGCGAT TCCTGTTCAT CATATGGAAG GACATTTATT GGCTCCAATG
CTGGAAGATA ATCCACCGGA GTTTCCGTTT GTTGCATTGC TCGTGTCTGG CGGACATACG
TTGATGGTTG AAGTTAAAGG CATTGGTGAT TATCAAATTC TTGGAGAATC TGTGGATGAT
GCTGCGGGTG AAGCGTTTGA TAAAACGGCA AAATTAATGG GATTAGATTA CCCAGGTGGC
CCACGACTTT CTAAATTAGC GGAAGCGGGT GTGAAAGGTC GTTTTAAATT CCCTCGCCCA
ATGACTGATC GTCCGGGACT TGATTTTAGT TTTTCAGGAT TAAAAACATT TGCTGCAAAT
ACCATTCGAG CAAATGATGA CGATGAACAG ACTCGTGCAG ATATTGCATT TGCTTTCCAA
GAAGCAGTGG CGGATACGTT AGCGATAAAG TGTCGTCGTG CTTTAAAACA AACAGGTATG
AAGCGATTGG TGATGGCGGG TGGTGTGAGT GCAAATACGT ATCTTCGTCA GGAATTAGAA
GCCATGATGA AGAAAATTGG TGGCGAGGTA TTTTACCCTC GAACTGAGTT TTGTACGGAT
AACGGTGCGA TGATTGCTTA TGCAGGAATG CAACGTTTGA AAAATGGCGA AACAACAGAT
TTGGCCGTTC AAGCTAAACC TCGTTGGCCG ATAGATCAAT TAGCACCGAT TAAATAA
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| Protein sequence | MRILGIETSC DETGVAIYDD EKGLLAHQLY SQVKLHADYG GVVPELASRD HVKKTIPLIQ
AALNDAGMTK DDIDGIAYTA GPGLVGALLV GSTIGRSIAY AWDVPAIPVH HMEGHLLAPM
LEDNPPEFPF VALLVSGGHT LMVEVKGIGD YQILGESVDD AAGEAFDKTA KLMGLDYPGG
PRLSKLAEAG VKGRFKFPRP MTDRPGLDFS FSGLKTFAAN TIRANDDDEQ TRADIAFAFQ
EAVADTLAIK CRRALKQTGM KRLVMAGGVS ANTYLRQELE AMMKKIGGEV FYPRTEFCTD
NGAMIAYAGM QRLKNGETTD LAVQAKPRWP IDQLAPIK
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