Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2689 |
Symbol | cca |
ID | 6988459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 2911481 |
End bp | 2912704 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643380959 |
Product | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase |
Protein accession | YP_002264027 |
Protein GI | 209696097 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.289475 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATTT ATTTAGTAGG TGGTGCAGTT CGAGATTCAC TCCTCAATAT TGACGTAAAA GATAAAGATT GGGTCGTTGT TGGTTCTACA CCCACTCACA TGAATTCGCT TGGCTACCAA AGCGTAGGGC AAGACTTTCC TGTTTTCTTA CACCCAAGAA CAAAAGAAGA ATACGCCTTA GCCAGAACAG AACGAAAAAG TGGTCAAGGA TATAAAGGAT TCACTTGTTA CGCAGAAGCA GATGTCACAT TAGAAGAAGA TTTGTTGCGT CGAGATTTGA CGATTAATGC GATAGCTCAA TCAGATAAGG GCCTATTAAT TGATCCTTAC CATGGGCAAG AAGATTTAAA GAATCGGTTA TTACGCCATG TATCCAATGC CTTTGTCGAA GACCCGTTAC GGGTACTACG AGTTGCTCGT TTTGCCGCTC GCTTTCATTA TCTTGGTTTT ACAATTGCAC CAGAAACAAT GCAATTAATG AAAACACTTG TTTCGAGTGG CGAGCTCTCT CATTTAACCC CAGAACGAGT ATGGCAAGAA TGGGAAAAAT CATTATCAAG TAAACACCCA AATATTTTTC TTTCTGTACT CAAAGAATGT GGTGCATTAG CGGTCGTATT GCCGGAAATT GATGCTTTAT TTGGCGTTCC TCAACCAGAA CAATGGCACC CAGAAATTGA TACTGGAATG CATACATTGA TGGTTTCTCA GCAAGCATCA TTACTAAGTA CCTCACTTCC AATACGCTTT GCAGCGCAAG TTCATGATTT AGGTAAGGGG ATTACTCCTG AATCAGAATG GCCAAGCCAC AAAATGCATT GCCATACAGG GATAAAAGTA ATCAAGAATT TGTGTAAGCG AGTTCGAGTC CCTAATGAAT ACAAAGAGCT AGCCTTATTG GTTTGTGAGC ATCACACAAA TGTCCACAGA GCTTCAGAAC TACGAGCACA AACCTTTATC AAGATATTCG ATAAAATGGA CTTATGGCGT AAACCAGAAC GTTTAGAATC GATTCTATTG TGCTGCCAAG CCGATCATGC AGGGCGACTA GGGTTAGAGT TAAATCCATA CCCTCAAAAA GAACGAATGG AATCCGCATT TAATGCAGCA CAACATGTAG AGGTAAAAGA AGTGGTCGCA GCAGGGTTTA AAGGACCAGA AATCAGAGAT GAATTAACCA AGAGAAGAAT TGAAGCTGTC AAAGTGGCAC TTTTAATAAA CTAG
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Protein sequence | MQIYLVGGAV RDSLLNIDVK DKDWVVVGST PTHMNSLGYQ SVGQDFPVFL HPRTKEEYAL ARTERKSGQG YKGFTCYAEA DVTLEEDLLR RDLTINAIAQ SDKGLLIDPY HGQEDLKNRL LRHVSNAFVE DPLRVLRVAR FAARFHYLGF TIAPETMQLM KTLVSSGELS HLTPERVWQE WEKSLSSKHP NIFLSVLKEC GALAVVLPEI DALFGVPQPE QWHPEIDTGM HTLMVSQQAS LLSTSLPIRF AAQVHDLGKG ITPESEWPSH KMHCHTGIKV IKNLCKRVRV PNEYKELALL VCEHHTNVHR ASELRAQTFI KIFDKMDLWR KPERLESILL CCQADHAGRL GLELNPYPQK ERMESAFNAA QHVEVKEVVA AGFKGPEIRD ELTKRRIEAV KVALLIN
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