Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2681 |
Symbol | |
ID | 6987873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 2903883 |
End bp | 2904563 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643380951 |
Product | hypothetical protein |
Protein accession | YP_002264019 |
Protein GI | 209696089 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1392] Phosphate transport regulator (distant homolog of PhoU) |
TIGRFAM ID | [TIGR00153] conserved hypothetical protein TIGR00153 |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0612362 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGTAA ATACTATTAT GGGGTTATTC GCAAAGTCCC CAATGAAACC TTTGCAGCGT CACGTTGTTT GTGTCAATGA ATGCTGCTCA CTGCTTATTC CGTTTTTCGA AACGTGTGCA ACTGGTGATT GGGAAAAAGC GAATGAACTT CGTGCGCAAA TTTCTCATCT TGAGAAAGAA GCGGATGTTC TGAAACGTGA AATTCGTTTA AAACTTCCTC GCGGGTTGTT TATGCCTGTT GATCGTACCG ATATGCTCGG CCTTCTGACT CAACAAGATA AACTCGCAAA CTTGGCTAAA GATATCGCAG GTCGCGTTGT CGGTCGTCAA CTTGAAATTC CAACCTCTAT GCAGGATGCA TTTCTAGCTT ATGTTCAGCG TTGTTTAGAT GCGGCTAACC AAGCCCAAGA AGTAATCAGC GAATTAGACG AACTGTTAGA AACCGGCTTT AAAGGACGTG AAGTCACCTT AGTTGCAGAA ATGATCAACA AACTAGATAT CATTGAAGAT GATACTGATG ATCTGCAGAT TCAATTGCGT CAACAACTCA TGGGCATCGA GCACAAATAC AACCCAATCG ATGTTATGTT CCTTTATAAA ATTCTTGAGT GGGTTGGTGG CATTGCCGAC CAAGCACAAC GTGTTGGTTC TCGTTTAGAA CTGATGTTAT CTCGCTCATA A
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Protein sequence | MPVNTIMGLF AKSPMKPLQR HVVCVNECCS LLIPFFETCA TGDWEKANEL RAQISHLEKE ADVLKREIRL KLPRGLFMPV DRTDMLGLLT QQDKLANLAK DIAGRVVGRQ LEIPTSMQDA FLAYVQRCLD AANQAQEVIS ELDELLETGF KGREVTLVAE MINKLDIIED DTDDLQIQLR QQLMGIEHKY NPIDVMFLYK ILEWVGGIAD QAQRVGSRLE LMLSRS
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