| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2674 |
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| Symbol | nudF |
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| ID | 6987870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2892805 |
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| End bp | 2893452 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643380944 |
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| Product | ADP-ribose pyrophosphatase |
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| Protein accession | YP_002264012 |
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| Protein GI | 209696082 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
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| TIGRFAM ID | [TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTCAT CATCAAGTAT AGTACGAGCG AATCAATTTA CGGTTGATGA TGTTGATGTT
GTATCGAAAA ATTCGTTATA CAACGGTTTT TTTAAAATGA CCAATATTGC TTTTCGTCAT
CGGTTATTCA GTGGTGGGTG GAGCGATATT ATAGAGCGTG AATTATTTGA ACGCGGTCAT
GCCGTTGCTT TGTTGCCTTA TGATCCGGTG ACTGACAGTG TTGTTATTAT CGAACAAATT
AGAGTTGGGG CTTTAGAGTC TGCTTCTCTA TGGCAATATG AAATCGTTGC GGGCATGATT
GATAAAGATG AGTCTGCAGA ACAAGTTGCG ATTAGAGAAA CAGAAGAAGA AGCGGGGATT
TCGGTCTCTA AATTAGAGAA AATATCACAC TTTTACCCTT CGTCGGGTGG GTGTACTGAA
CAGTTAGATG TGTTTGTTGG TTGCATTAAC TCATTAGAAG CCATCGGTAT ACATGGCCTC
GAAGAGGAAG GTGAAGACAT CAAGGTTCAT GTTATGACTC GAGAAGATGC GTATGCTTTA
GTGACTCGTG GCATAATTGA GAATGCCGCC ACAATTATTG CGCTCCAATG GTTAGAATTA
AATGTTTCTC GCTTAAGATC ACAGTGGAAC ATGATAGAAA ATGCGTAA
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| Protein sequence | MNSSSSIVRA NQFTVDDVDV VSKNSLYNGF FKMTNIAFRH RLFSGGWSDI IERELFERGH
AVALLPYDPV TDSVVIIEQI RVGALESASL WQYEIVAGMI DKDESAEQVA IRETEEEAGI
SVSKLEKISH FYPSSGGCTE QLDVFVGCIN SLEAIGIHGL EEEGEDIKVH VMTREDAYAL
VTRGIIENAA TIIALQWLEL NVSRLRSQWN MIENA
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