Gene VSAL_I2670 details

Gene Information

• Locus tag: VSAL_I2670
• Symbol: parE
• ID: 6988946
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: -
• Start bp: 2888923
• End bp: 2890803
• Gene Length: 1881 bp
• Protein Length: 626 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 643380940
• Product: DNA topoisomerase IV subunit B
• Protein accession: YP_002264008
• Protein GI: 209696078
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
• TIGRFAM ID: [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGAAC AATATAATGC AGGAGCCATT GAGGTTCTAA ATGGCCTTGA GCCCGTTCGT 
CGCCGTCCTG GTATGTATAC CGACACCTCT CGCCCAAACC ATTTAGGGCA AGAAGTTATA 
GATAACAGTG TCGATGAAGC CTTAGCCGGA CACGCGAAAA AAGTTGAAGT AATTTTGCAT 
GCAGATCAAT CGCTTGAAGT GATTGATGAT GGCCGTGGTA TGCCTGTAGA TATCCATCCA 
GTAGAGAAAG TCTCTGGTGT GGAGCTTATT TTATGTAAGT TGCACGCCGG TGGTAAATTC 
TCAGGTAAAA ACTACGAATT CTCCGGTGGT TTGCATGGGG TTGGTATCTC GGTCGTAAAT 
GCGTTATCAA AACGTGTTGA AGTGACCGTT CGTCGTGATG GCGAAATTTA TGAAATTGCG 
TTTGAGCATG GTGAAAAAGT ATCAGACTTA ACTGTCGTTG GTACTTGTGG TCGACGTAAC 
CGTGGTACCA GTGTGCATTT TTGGCCGGAT ACCAGTTACT TTGATTCACC TAAATTTTCG 
GTTTCTCGCC TTGTTAATAA TTTAAAAGCC AAAGCGGTAT TATGCCCAGG TTTAGAAATT 
GTTTTTAAAG ACAAAGTAAA CGATAAAGAA TACCAATGGT GTTATGAAGA CGGTTTAAAA 
GATTATCTTT TAGAAGGTGT CGCGGGTTAT ACCCTATTAC CTGAAATTCC ATTCACTGGT 
GCATTTTTAG GTAAAGGCGA GGCGGCTGAT TGGGCGGTTA CGTGGTTACC TGAAGGTGGA 
GAATTAGTTT CTGAAAGTTA CGTTAACCTT ATCCCTACTG CGCAAGGCGG TACACACGTA 
AATGGTATGC GCCAAGGACT TCTTGATGCA ATGCGTGAGT TTTGTGAATT CCGTAACTTG 
CTCCCACGCG GGGTTAAATT AACCGCTGAT GATATTTGGG ATCGTTGTGC TTACGTCTTG 
TCGGTTAAGA TGCAAGATCC ACAGTTCGCG GGTCAAACCA AAGAACGTTT ATCATCGAGA 
CAATGTGCTG CGTTTATATC TGGCGTACTT AAAGATGCTT TCAGCTTATG GTTGAACGAA 
AAACCACAAA TCGCAGAACT TATCGCCGAA GCGTGTATTG CTAATGCCCA TCGTCGTATG 
CGTGCAGCGA AAAAAGTCGT TCGTAAGAAA ATTGCTTCTG GTCCTACGTT ACCAGGAAAA 
TTGACCGATT GTTCAATTCA AGATTTGGCT CGTACTGAAC TTTTCTTAGT GGAAGGGGAC 
TCGGCGGGGG GCTCAGCTAA GCAAGCGCGT GACCGTGAAT TCCAAGCGGT AATGCCATTA 
CGTGGTAAAA TTCTTAATAC GTGGGAAGTC TCGGCGGATC AAGTGTTAGC CTCTCAAGAG 
GTACACAATA TTTCAGTCGC GTTAGGTATT GATCCTGATT CGGACGATTT ATCGGGATTA 
CGTTACGGTA AAGTTTGTAT CTTAGCCGAT GCCGATTCAG ATGGGCTTCA TATCGCAACA 
TTGTTGTGTG CTTTATATCT AAAACACTTC ACGTCTTTAG TTCGTGCTGG TCACGTCTAT 
GTGGCAATGC CGCCACTGTA TCGTATCGAC TGCGGTAAAG AAGTTTTCTA CGCCCTTGAT 
GAGGCAGAGA AAGAAGGTGT GTTAGAGCGT TTAAGTAATA AACGTGCAAA AATTAATGTT 
CAACGATTTA AAGGATTGGG CGAGATGAAC CCACTTCAAC TTCGTGAAAC AACCATGGAT 
CCAAACACCC GTCGTCTTGT TCAACTGACC ATTGATGATG ATGAAAAAAC TAATGAAATG 
ATGGATATGC TTTTAGGTAA AAAACGTGCT GACGATCGTC GAGCTTGGTT ACAATCTAAT 
GGCGATCTGG CAGAGGTATA A 

 

Protein sequence

MTEQYNAGAI EVLNGLEPVR RRPGMYTDTS RPNHLGQEVI DNSVDEALAG HAKKVEVILH 
ADQSLEVIDD GRGMPVDIHP VEKVSGVELI LCKLHAGGKF SGKNYEFSGG LHGVGISVVN 
ALSKRVEVTV RRDGEIYEIA FEHGEKVSDL TVVGTCGRRN RGTSVHFWPD TSYFDSPKFS 
VSRLVNNLKA KAVLCPGLEI VFKDKVNDKE YQWCYEDGLK DYLLEGVAGY TLLPEIPFTG 
AFLGKGEAAD WAVTWLPEGG ELVSESYVNL IPTAQGGTHV NGMRQGLLDA MREFCEFRNL 
LPRGVKLTAD DIWDRCAYVL SVKMQDPQFA GQTKERLSSR QCAAFISGVL KDAFSLWLNE 
KPQIAELIAE ACIANAHRRM RAAKKVVRKK IASGPTLPGK LTDCSIQDLA RTELFLVEGD 
SAGGSAKQAR DREFQAVMPL RGKILNTWEV SADQVLASQE VHNISVALGI DPDSDDLSGL 
RYGKVCILAD ADSDGLHIAT LLCALYLKHF TSLVRAGHVY VAMPPLYRID CGKEVFYALD 
EAEKEGVLER LSNKRAKINV QRFKGLGEMN PLQLRETTMD PNTRRLVQLT IDDDEKTNEM 
MDMLLGKKRA DDRRAWLQSN GDLAEV