| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2669 |
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| Symbol | parC |
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| ID | 6987867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2886649 |
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| End bp | 2888919 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643380939 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_002264007 |
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| Protein GI | 209696077 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00978716 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCAG AAATGTCCTT AGAAGGTGTT GAACAGCTGC CGCTGCGCAA GTTTACAGAA
GACGCTTATC TAAATTACTC CATGTACGTA ATCATGGATC GCGCGTTACC TTATATTGGT
GATGGTTTAA AACCGGTTCA ACGTCGTATT ATTTTTGCGA TGTCTGAATT AGGTTTGTCT
GCGAATGCAA AATACAAAAA ATCGGCACGT ACAGTTGGTG ATGTACTCGG TAAGTATCAC
CCACATGGTG ATTCTGCGTG TTACGAAGCC ATGGTATTAA TGGCTCAACC TTTCTCTTAT
CGTTATCCAT TGGTTGATGG TCAAGGCAAC TGGGGGGCTC CAGATGACCC TAAGTCGTTC
GCCGCAATGC GTTATACAGA ATCAAAACTG TCTAAGTTTG CCGATGTATT ACTTGGTGAG
ATAAGCCAAG GTACGGTTGA TTGGCAGCCC AATTTTGATG GGACGATGAA AGAGCCAAAA
ATCTTACCAG CACGTCTGCC TCATATATTA CTGAACGGTA TTATGGGAAT CGCGGTTGGT
ATGGCGACAG ATATCCCACC TCATAATGTA CGTGAAGTTG CGAATGCGAC CGTGCATTTA
TTGGATAATC CAAAAGCGGA TTTAGATGAA GTGATGAACT TTATCCAAGG CCCTGATTAC
CCAACAGAAG CGGAAATCAT TACATCGCAT TCTGATATTA AGAAGATTTA CAGTACGGGT
CGAGGCAGCG TTAAAATGCG CGCAGTGTGG CATAAAGAAG GCAGTGATAT TGTTATTACT
GCATTGCCAC ATCAAGTGTC GGGCAGTAAG TTATTAGAAC AAATTGCCAA TCAAATGCGA
GCGAAGAAAT TACCAATGGT AGACGATCTT CGTGATGAAT CGGATCATGA AAATCCGACA
CGTATCGTGA TTGTTCCTCG TTCAAATCGT ATTGAAGCTG AGCCATTAAT GAATCATCTA
TTTGCTTCTA CGGATCTTGA AAAGAGTTTC CGTGTAAACT TAAATATGAT TGGTTTGGAT
TTACGTCCAC AGGTGAAGGG CTTAGTTAGC ATTCTTAATG AATGGATTGA ATTTCGTCGC
ACCACGGTAC GTAAACGTCT GCAGCATCGT CTAGATAAAA TATTAGCGCG TTTGCATATT
TTAGATGGTT TGCTTGCTGC GTATTTGAAT ATCGATGAAG TTATCGAAAT TATTCGTACA
GAAGACGATC CTAAACACGA GTTAATGACT CGCTTTGATT TAACCGCGAT TCAAGCGGAA
GCCATTTTAG AGATTAAACT TCGTCAGTTA GCAAAACTGG AAGAGATTAA GATTCGTGGC
GAGCAAGATG AATTAGCGAA AGAGCGTGAT CAACTTGAGA AACTGTTGGG TTCTGAGCGT
CGTTTAAGTA CGTTAATTAA GAAAGAAATC TTAGCCGATG CTGAAAAGTT TGGTGATGAT
CGTCGTTCTC CATTAATCGA ACGTGATGAA GCGAAAGCAA TGACGGAACG TGATCTAATT
CCAAGTGAAG CGATTACGGT TATTCTTTCT GATAAAGGTT GGATACGTCA TGCAAAAGGT
CATGAGGTTG ATCCAACAAC GCTAAACTTT AAATCTGGTG ATAAATACCT TACTCATGCT
CATGGTAAGA GTAATGCACC GGCGGTCTTT ATCGGAAATA ATGGTCGAAG TTATGCGCTT
GAATCACATA CATTACCGTC AGCAAGAAGC CAAGGCGAGC CAATTACAGG TCGTCTAAAT
ATTACTGCTG GTAGCCAAAT TACGCATGTA GTTATGGGTG AAGAAGATCA AACGTGGTTA
ATCAGTTCTG ATGCGGGTTA TGGTTTTGTC TGTAAAGGCA GTGACTTATT ATCAAAGAAT
AAGAATGGTA AAACATTGTT AACGCTTCCT GATAATTCTT TAGTTATGAA TCCAGAGACG
GTATCGGATC TTGATAGCGA TGAGATACTC GCCATTACGA ATGAAGGCAG AATGCTTCTG
TTCCCTATTA AAGATTTACC TCAATTAGGT AAAGGTAAGG GAAACAAGAT CATTAATATT
CCAGCGGCTC GTTCTAAATC GCGAGATGAA TTCTTGTCTT ATTTATTGCC ATTACCTCAA
GGCGCAACGA TTACCCTCTA TGCAGGTAAG CGTAAATTAG GCTTGAAACC AAGTGATTTA
GATAATTTCC GAGGTGAGCG TGGCCGTCGT GGTAGTTTGT TACCAAGAGG CTTACAGCGA
GTTACTCGTA TTGATATCAA TGGTGACAAT GGTTCTACAG AAGAGAGTTA A
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| Protein sequence | MSAEMSLEGV EQLPLRKFTE DAYLNYSMYV IMDRALPYIG DGLKPVQRRI IFAMSELGLS
ANAKYKKSAR TVGDVLGKYH PHGDSACYEA MVLMAQPFSY RYPLVDGQGN WGAPDDPKSF
AAMRYTESKL SKFADVLLGE ISQGTVDWQP NFDGTMKEPK ILPARLPHIL LNGIMGIAVG
MATDIPPHNV REVANATVHL LDNPKADLDE VMNFIQGPDY PTEAEIITSH SDIKKIYSTG
RGSVKMRAVW HKEGSDIVIT ALPHQVSGSK LLEQIANQMR AKKLPMVDDL RDESDHENPT
RIVIVPRSNR IEAEPLMNHL FASTDLEKSF RVNLNMIGLD LRPQVKGLVS ILNEWIEFRR
TTVRKRLQHR LDKILARLHI LDGLLAAYLN IDEVIEIIRT EDDPKHELMT RFDLTAIQAE
AILEIKLRQL AKLEEIKIRG EQDELAKERD QLEKLLGSER RLSTLIKKEI LADAEKFGDD
RRSPLIERDE AKAMTERDLI PSEAITVILS DKGWIRHAKG HEVDPTTLNF KSGDKYLTHA
HGKSNAPAVF IGNNGRSYAL ESHTLPSARS QGEPITGRLN ITAGSQITHV VMGEEDQTWL
ISSDAGYGFV CKGSDLLSKN KNGKTLLTLP DNSLVMNPET VSDLDSDEIL AITNEGRMLL
FPIKDLPQLG KGKGNKIINI PAARSKSRDE FLSYLLPLPQ GATITLYAGK RKLGLKPSDL
DNFRGERGRR GSLLPRGLQR VTRIDINGDN GSTEES
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