| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2668 |
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| Symbol | |
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| ID | 6987866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2885461 |
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| End bp | 2886525 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643380938 |
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| Product | exported serine protease |
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| Protein accession | YP_002264006 |
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| Protein GI | 209696076 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02038] periplasmic serine pepetdase DegS |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00113896 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCTCAT TTTTACTGCG TTCTGCTGTA ATAGGCACAG TAACTGCCGC TGTATTACTT
CTTGCTTTTC CTAACCTTCG CTCAGGTATA ACGCCTGAAC AAGATACGAA CCAACAAACA
CCTCGAATCA GTAACCAAAT TTCATTTAAT GATGCGGTAC GTCGAGCTGC GCCTGCTGTC
GTAAATATTT ATAGCCGTAA ATATAATGAT AAAGATCGAT TACGACTAGA TACAGAAGGC
CTTGGTTCTG GTGTTATTGT TAGCGATAAA GGCTACATCA TTACCAATTA CCATGTAGTT
GCAGAAGCCG ATCAAATTAT TGTTGCCCTT CAAGATGGAC GATTGTTTAA TTCGCAATTA
ATTGGGAAAG ATAAACGTAC CGATCTTGCT GTTCTACAAA TTAAAGACAC CAACCTTCCA
GTGATCCCTT TAAATCCGAA ATATCAAGCG GATATTGGTG ATGTCGTGTT GGCTATTGGT
AATCCTTATA ATTTAGGACA GACCACCACA TTTGGTATTA TTTCAGCAAC GGGTCGTGCT
GCCTTAAGTT CTGATGGTAC TCAAGGCCTT ATTCAAACAG ATGCTGCGAT TAACCGCGGT
AATTCAGGCG GGGCGCTCGT TAATACTCGA GGAGAATTAG TCGGTATCAA TACCGCCTCT
TTTCAACAAG CCACAGAGCT AGAAACCTAT GGGATTTCTT TCGCGATTCC TTACGCACTG
GCAGATAAGA TAATGCGTCG CTTAATTGCT GATGGTCAAG TTATCCGTGG TTATATAGGT
ATTGATGGCA GAGACATAAA TCCAGCAATG GCTCGCTTAA TGAATGCCGA TAATATCAAT
GGTATTTTAG TTCTTGGTGT TGCTCCTGAT AGCCCGGCTG AAAAAAGTGG CATTATGACT
CAGGATATAA TTACCAGTAT TGATGGGCAA ACAGTCACTA ATCGACAAAG TGTCATTGAT
ATTGTGACTG AATTACGTCC AGGAACTAAC GTTAATGTCG ATGTAATTCG AAAAGGGGTG
ACTCAAACTA TTCCACTAAT GATCGAAGAA GACCCCGCGG ACTAG
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| Protein sequence | MLSFLLRSAV IGTVTAAVLL LAFPNLRSGI TPEQDTNQQT PRISNQISFN DAVRRAAPAV
VNIYSRKYND KDRLRLDTEG LGSGVIVSDK GYIITNYHVV AEADQIIVAL QDGRLFNSQL
IGKDKRTDLA VLQIKDTNLP VIPLNPKYQA DIGDVVLAIG NPYNLGQTTT FGIISATGRA
ALSSDGTQGL IQTDAAINRG NSGGALVNTR GELVGINTAS FQQATELETY GISFAIPYAL
ADKIMRRLIA DGQVIRGYIG IDGRDINPAM ARLMNADNIN GILVLGVAPD SPAEKSGIMT
QDIITSIDGQ TVTNRQSVID IVTELRPGTN VNVDVIRKGV TQTIPLMIEE DPAD
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