| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2667 |
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| Symbol | |
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| ID | 6987865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2883961 |
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| End bp | 2885328 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643380937 |
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| Product | exported serine protease |
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| Protein accession | YP_002264005 |
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| Protein GI | 209696075 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0124774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAC CTTTATTAAT TTTAGGCTTA CTGACGTTAA CGATCAGTAC CATCATCACC
CCAATTCAAA CTCAAGCTGC CCTTCCTCTT ACTGTCAATT CTCAGCAGCT GCCAAGTTTG
GCTCCGATGC TCGAAAAAAT AACCCCCGCA GTGGTTAGTA TTTCTGTCGA AGGGACTCAA
CTATCAAAAC GTCAGATCCC TGAACAATTT CGTTTCTTTT TAGGTCCAGA CTTCCCAGAA
GAGCAAGCTC AAGAGCGCCC ATTCAAAGGG TTAGGCTCTG GCGTTATACT TGATGCCCAA
AAAGGCTATA TCGTTACCAA TCATCACGTC ATTAATAATG CCAAAGAAAT CCTCGTTCAG
TTGCATGATG GCCGAGAATA TAAAGCAGAA CTCATTGGCA GTGACGAAAT GTCAGACATT
GCCTTATTAA AATTAGAGGA AGCTAAAGAC TTAACACAGA TAGTGCTTTC TGATTCAGAT
GATTTACGCG TGGGAGATTT CAGTGTTGCT ATCGGTAATC CTTTTGGTTT AGGGCAAACC
GTCACCTCGG GTATCGTCTC AGCCTTAGGA CGCAGCGGAC TAAATCTTGA AAATTTTGAA
AACTTCATCC AAACCGATGC AGCAATTAAT AGCGGTAACT CTGGCGGGGC ATTAGTCAAT
CTTAATGGTG AGCTGATTGG GATAAATACC GCAATTTTAG GTCCGAATGG CGGTAATGTC
GGTATTGGTT TTGCCATCCC ATCGAACATG GTTCGAAACT TATCTGAGCA AATTATTGAG
TTTGGTCACG TCAAGCGAGG GATCCTTGGT GTTCAAGGTG GAGAACTCAC CGCTGAGCTT
GCTGAAGCAT TCGATTATGA CACTAATCAC GGTGCATTTG TCAGCCAAGT ATTACCCGAT
GGCGCTGCCG AAAAAGCGGG AATAAAAGCA GGCGATATTT TAATTTCCCT GAATGGAAAA
AACATTCAAA GTTTTGGGGA ACTGAGAGCC AAAGTAGCCA CACTTGGCGC AGGTAAAAAA
ATCACTTTAG GGTTAATCCG TGATGGCAAA GAGAAAACCG TTATTGCTAC TCTCGCAGAA
GCCGACCAAA TAAAAACAAA AGCAGAAAAC CTACATGAAG GACTAAAAGG CGCTCAATTA
AAAAATACTG CATCGTCAGA TCCGATAAAG GGTGTAAAAG TCAGTGCAAT ACAAAAAAGG
TCAATGGCAC AACGTTATGG CTTACAGAAA GACGATATTA TTATTGGCGT CAATCGAACT
CAGATTAAGA ACTTGCAACA ATTTAGACAA TTACTCGACA GCAAACCGCC CGTTTTAGCT
CTCAACATTC AACGTGGGAA GCAAACCTTA TATCTTGTTA TTCGTTAA
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| Protein sequence | MKKPLLILGL LTLTISTIIT PIQTQAALPL TVNSQQLPSL APMLEKITPA VVSISVEGTQ
LSKRQIPEQF RFFLGPDFPE EQAQERPFKG LGSGVILDAQ KGYIVTNHHV INNAKEILVQ
LHDGREYKAE LIGSDEMSDI ALLKLEEAKD LTQIVLSDSD DLRVGDFSVA IGNPFGLGQT
VTSGIVSALG RSGLNLENFE NFIQTDAAIN SGNSGGALVN LNGELIGINT AILGPNGGNV
GIGFAIPSNM VRNLSEQIIE FGHVKRGILG VQGGELTAEL AEAFDYDTNH GAFVSQVLPD
GAAEKAGIKA GDILISLNGK NIQSFGELRA KVATLGAGKK ITLGLIRDGK EKTVIATLAE
ADQIKTKAEN LHEGLKGAQL KNTASSDPIK GVKVSAIQKR SMAQRYGLQK DDIIIGVNRT
QIKNLQQFRQ LLDSKPPVLA LNIQRGKQTL YLVIR
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