Gene VSAL_I2662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2662 
Symbol 
ID6988960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp2880089 
End bp2880697 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content46% 
IMG OID643380932 
Productubiquinol-cytochrome c reductase iron-sulfur subunit (rieske iron-sulfur protein) 
Protein accessionYP_002264000 
Protein GI209696070 
COG category[C] Energy production and conversion 
COG ID[COG0723] Rieske Fe-S protein 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0104541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGAAA GTTGGATGAG CAATGCGCCA GTGAGTAATG GTCGACGTCG TTTCTTGACT 
GCAACAACAG CTGTTGTTGG TGGTTTAGGG GCAGCGGCGG TGGCCGTACC TTTTATTAAA
TCTTGGAACC CGAGTGCACG AGCCAAAGCG GCAGGTGCAC CGGTTGAAGT CGACATCAGT
AAGCTTGAAA ACGGGCAAAT GGTTCGTGTT GAATGGCGAG GTAAGCCTGT ATGGGTTGTT
CGTCGTTCAG AAGCACTTCT GCAATCATTA ACTGAAATTG ACGGACAACT TAGAGACCCA
TCTTCAGGTG AAGAGCAGCA ACCTCAATAT GCACAAAATG CATATCGCTC AATTAAACCT
GAGATATTTT TAGCCGTTGG TATTTGTACT CACCTTGGTT GTTCACCTAC CTATTTACCT
GACAGTTTTA GTGAACAAGT TAAAGGAGTT AACTCTGGTT TCTTCTGCCC ATGCCATGGT
TCTAAATTTG ATATGGCAGG TCGAGTATTC CAAGGCGTAC CTGCACCATT AAATCTCGTG
GTGCCAAAAC ACATGTACCT TAGTGATACT CGTATCCTAA TTGGGGTTGA TGACGGAGGG
GAAGCCTAA
 
Protein sequence
MGESWMSNAP VSNGRRRFLT ATTAVVGGLG AAAVAVPFIK SWNPSARAKA AGAPVEVDIS 
KLENGQMVRV EWRGKPVWVV RRSEALLQSL TEIDGQLRDP SSGEEQQPQY AQNAYRSIKP
EIFLAVGICT HLGCSPTYLP DSFSEQVKGV NSGFFCPCHG SKFDMAGRVF QGVPAPLNLV
VPKHMYLSDT RILIGVDDGG EA