Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2661 |
Symbol | petB |
ID | 6987862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2878821 |
End bp | 2880089 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643380931 |
Product | ubiquinol--cytochrome c reductase, cytochrome B |
Protein accession | YP_002263999 |
Protein GI | 209696069 |
COG category | [C] Energy production and conversion |
COG ID | [COG1290] Cytochrome b subunit of the bc complex |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00823249 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACCAT TACTTGATTG GGTAGAAAAA CGTCTACCTG CAATGAATGC CTATAAAAAG CATTTATCTG AATATCCAAT GCCGAAAAAC TTTAACTTTT GGTACTTTTT TGGCTCATTA GCAATGCTTG TACTCGTTAA TCAGTTAATT ACGGGTATTT GGTTAACAAT GAATTATGTT CCTTCTGGAG AAGGTGCATT TGCTTCTGTT GAATACATCA TGCGTGATGT CGATTACGGT TGGCTATTAC GTTATATGCA CTCCACTGGG GCGTCAGCTT TCTTTGTTGT GGTTTATCTT CATATGTACC GCGGTTTAAT TTACGGCTCT TACCAGAAGC CTCGTGAACT GTTGTGGTTA TTTGGTATGT TGATTTTCTT AGTGTTAATG GCTGAAGCTT TCATGGGGTA TTTATTACCA TGGGGACAAA TGTCTTACTG GGGAGCTCAA GTTATTATCT CTCTGTTTGG TGCTATCCCT GTTATTGGTG ATGACCTAAC ACTGTGGATC CGTGGTGATT ATGTTATCTC GGGTGCGACG CTCAACCGTT TCTTTGCCTT ACACGTTATC GCTTTGCCGA TTGTGTTATT GCTTTTAGTT GTTCTGCATG TTCTAGCTTT GCATGAAGTC GGGTCAAACA ACCCTGATGG TATTGAACTT AAAAAACCAA AAGCGAAAGA TGATAAGGGT GAGCATAAAA CTCAATTTAA ATTCCATGAG TATTATACGA AGAAGTACAA CATTATTGAT TCTGTTCCTT TCCATCCTTA TGGGACGGTA AAAGATATGA TCGGTGTTGC TGGCTTCTTA TTCTTCTTTT GCTATGTATT GTTCTTTAAT CCTGAAATGG GTGGTTACTT CTTAGAAGGA CCAAACTTTG AAGCCGCAAA TCCACTGAAA ACGCCAGAGC ATATTGCCCC TGTGTGGTAC TTCACTCCAT TTTATGCAAT CTTGCGTGCC GTTCCTGATA AGTTAATCGG TGTTGCAGCA ATGGGTGCTT CAATTGTTGT GCTGTTCCTT CTTCCTTGGT TGGATCGCTG TAAAGTAAGG TCGTACCGTT ACCGTAGTAA GTTGCATTTA CTTAATATTG CGCAGTTTAC TGTGAGCTTT ATTGCTCTTG GTGTTTTGGG TTCATTACCT GCAACGTCAC TGTATACATT GTTAGCTCAG ATATTCAGCT TAACTTACTT TATGTTCTTT GTTCTTTTGT TTGTTTACAG TAAAAATGAA AAAACAAAAC CATTACCAGA AAGGGTGACA TTCAAATGA
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Protein sequence | MQPLLDWVEK RLPAMNAYKK HLSEYPMPKN FNFWYFFGSL AMLVLVNQLI TGIWLTMNYV PSGEGAFASV EYIMRDVDYG WLLRYMHSTG ASAFFVVVYL HMYRGLIYGS YQKPRELLWL FGMLIFLVLM AEAFMGYLLP WGQMSYWGAQ VIISLFGAIP VIGDDLTLWI RGDYVISGAT LNRFFALHVI ALPIVLLLLV VLHVLALHEV GSNNPDGIEL KKPKAKDDKG EHKTQFKFHE YYTKKYNIID SVPFHPYGTV KDMIGVAGFL FFFCYVLFFN PEMGGYFLEG PNFEAANPLK TPEHIAPVWY FTPFYAILRA VPDKLIGVAA MGASIVVLFL LPWLDRCKVR SYRYRSKLHL LNIAQFTVSF IALGVLGSLP ATSLYTLLAQ IFSLTYFMFF VLLFVYSKNE KTKPLPERVT FK
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