| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2658 |
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| Symbol | sspB |
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| ID | 6987861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2876810 |
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| End bp | 2877265 |
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| Gene Length | 456 bp |
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| Protein Length | 151 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643380928 |
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| Product | ClpXP protease specificity-enhancing factor |
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| Protein accession | YP_002263996 |
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| Protein GI | 209696066 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2969] Stringent starvation protein B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATATTA GTTCTATGAT GCCTCGTCGC CCATATTTAT TACGTGCTTT TTATGAATGG
ATTGTAGATA ACGAGTTGAC TCCTCATCTT GTTGTTGATG CCACTATGAA TGGTGTTCGT
GTACCTGAAG AGTTTATCCA AGATGGACAG ATTATTTTAA ATACTGCCCC TCACTCTGTT
GGTAATTTAG AAATGGGAAA CGAAGCGGTA ACGTTTAATG CTCGTTTTAG CGGTCGTCCT
CATTCGATCA TTGTGCCAAT TTATGCAATT CAAGCTATCT ATGCCCGTGA GAATGGTGCT
GGGACTATGT TTGAACCTGA AGAAGCTTAT GAGATGGATG CTGATGAAGG TATCTTCGAA
GATGAATCAT TAGATTCAAC TGAAAATACG CTATCTGATG ATAAACCCGA GCCACCACGC
CCAAGTGGTC GTCCGAGTTT ACGAGTCGTC AAATAA
|
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| Protein sequence | MDISSMMPRR PYLLRAFYEW IVDNELTPHL VVDATMNGVR VPEEFIQDGQ IILNTAPHSV
GNLEMGNEAV TFNARFSGRP HSIIVPIYAI QAIYARENGA GTMFEPEEAY EMDADEGIFE
DESLDSTENT LSDDKPEPPR PSGRPSLRVV K
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