| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2648 |
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| Symbol | murF |
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| ID | 6988827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2865928 |
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| End bp | 2867286 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643380918 |
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| Product | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-ala nine ligase |
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| Protein accession | YP_002263986 |
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| Protein GI | 209696056 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCTTAA TGTCATTGAA TGAAGTGGCG AACATTTGTC AGGGACGTTT GAATGGGGTA
AATACCTCGA TTTCAAGCGT GTCGACTGAC AGTCGAAATA TTGAGGCTCA AGGGCTGTTT
GTTGCGCTGA TTGGTGAGCG ATTTGATGCC CATTCTTTTG TCTCAGTGGC TGAAGAACAA
GGTGCGGTTG CTTTACTTGT TTCACATGAG GTTGATTCTT CATTACCTCA AGTGATCGTT
AGTGATACGG AAAAAGCGTT TGGGTTACTC GGTCAATATG TTCATCAGCA ATGCCATTCC
TTTACCATTG CTTTAACTGG CAGTTGTGGC AAAACCACCG TAAAAGAAAT GTTAGCGTCT
ATTTTAAAAC GTTCTGGTGA AGTGTTAGCC ACTGCGGGTA ATTTTAATAA TGAAATCGGC
GTGCCATTAA CGTTGTTACG ATCTCAACCA AGTAATGATT TCTCTGTCAT TGAACTCGGC
GCTAATCATC AAAATGAAAT CGCTTATACC ACACAACTTG TTCGTCCTGA TGTCGCCTTA
GTAAATAATA TTGCGGCGGC ACATTTAGAA GGATTTGGTT CGATAGAGGG GGTTGCGAAG
GCAAAAGGTG AAATCTTTGA AGGTCTAAAA GAAAATGCGA CGGCTATTTA TAATTTAGAC
AGTAATGGAT TGCCTCGCTG GTCTGATTTA TTTGAAAACA AAACGGTATT GAGTTTTTCA
CAAGAAAATA ATCAAGCTGA CTTTCATGCA AGTAATATAG AGATCAATGG TCTTGGTGCA
TCTTCATTTA CATTGAATAC GCCGGTAGGA AGCATTGTGG TTTCACTCAC GATTATTGGT
AAGCATAATG TATCAAATGC AGTTGCGGCT GCGGCGTTAG CTGTTCAAGC TAACTGTACA
TTAGCTGATA TTCAACAAGG CTTACAATCG CTTGAAAATG TAAAAGGAAG GGTTGCTGTT
GAGGTTTTAC CTTCTGGTTT GAAAGTGATC GATGATACTT ACAATGCCAG CGTTCCTGCG
ATGAAAGCCG CAGTGGACTT ACTCGGTGGC TTTAATGGCA GTCGTTGGCT GGTTTTAGGC
AATATGGCTG AGCTTGGTAA AGAAAGCCTT GCACTTCACC GTGAAGTTGG TGAATATGCT
GCCCCATATC AATTTGAGCA AGTAATAACG TTTGGTGATG ATACCAAGGT GATCAGCGAA
TTATGCAATG GTCGACACTT TGAGTCTCGT AACGAATTAA ATGCCTATTT ATTGCAAGAA
TTACAATTAA TTAAACATAA TGAGGTTACC GTGCTAGTAA AAGGTGCCAA TAGTTCACGT
ATGAGCGAAG TAGTTTTAGC TCTTAAGGAG TGTCAGTAA
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| Protein sequence | MILMSLNEVA NICQGRLNGV NTSISSVSTD SRNIEAQGLF VALIGERFDA HSFVSVAEEQ
GAVALLVSHE VDSSLPQVIV SDTEKAFGLL GQYVHQQCHS FTIALTGSCG KTTVKEMLAS
ILKRSGEVLA TAGNFNNEIG VPLTLLRSQP SNDFSVIELG ANHQNEIAYT TQLVRPDVAL
VNNIAAAHLE GFGSIEGVAK AKGEIFEGLK ENATAIYNLD SNGLPRWSDL FENKTVLSFS
QENNQADFHA SNIEINGLGA SSFTLNTPVG SIVVSLTIIG KHNVSNAVAA AALAVQANCT
LADIQQGLQS LENVKGRVAV EVLPSGLKVI DDTYNASVPA MKAAVDLLGG FNGSRWLVLG
NMAELGKESL ALHREVGEYA APYQFEQVIT FGDDTKVISE LCNGRHFESR NELNAYLLQE
LQLIKHNEVT VLVKGANSSR MSEVVLALKE CQ
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