| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2639 |
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| Symbol | lpxC |
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| ID | 6987857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2855249 |
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| End bp | 2856166 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643380909 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_002263977 |
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| Protein GI | 209696047 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000056559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCAGAC AACGTACACT GAAAAGTATA GTGCAAATGA CAGGGGTGGG TTTACACTCA
GGCCGTAAAG TCACGCTTAC TCTTCGTCCT GCAGCGGCAA ATACAGGTGT AATTTATCGT
CGTACAGACC TTAATCCACC GGTTGATTTC CCTGCGGATC CAGAGTCAGT TCGCGATACT
ATGCTATGCA CAGCGTTAGT TAATGATGAT GGCGTACGAA TCTCAACGGT TGAACACTTA
AACGCTGCAT TAGCGGGCGT TGGTATTGAT AACGTAGTTA TCGAAGTCGA TGCTCCTGAA
ATTCCAATTA TGGATGGCAG TGCGAGTCCT TTTGTTTATC TTTTACAATC TGCGGGTATT
GAAGAACTTA ATACAGCGAA GAAATTCATT CGTATTAAGA AACCTGTTCG CATTGAAGAT
GGTGATAAGT GGGCTGAAAT TCGTCCTTAT AACGGTTTCC GCTTAGATTT CACAATTGAC
TTCAATCACC CTGCGATTGA ATCTGATGAC CAAAAATTAG TGTTTGAATT TTCAAGCCAA
TCGTTTATTA AAGATATTTC ACGTGCCCGT ACTTTTGGGT TCATGCGTGA TATCGAGTAC
TTACAATCAC AAAACCTATG TTTAGGCGGC AGTTTTGATT GTGCTATTGT ACTAGATGAT
TACCGTATTC TTAATGAAGA CGGGTTACGT TTTGAAAATG AATTTGTAAC ACATAAAGTA
CTAGATGCTG TTGGCGACCT TTATATGTGT GGTCATAGTA TTCTTGGTGA GTTAAGTGCT
TATAAATCAG GTCATGCACT AAATAATCAG TTGCTCCGTG CCGTTCTTGC TGATCAAGAA
GCATGGGAGT GGACAACCAT TGAAGATGAA AAAGACTCTC CAGTTGCGTT TATGCAACCG
GGAATGGTTC TTGCGTAA
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| Protein sequence | MIRQRTLKSI VQMTGVGLHS GRKVTLTLRP AAANTGVIYR RTDLNPPVDF PADPESVRDT
MLCTALVNDD GVRISTVEHL NAALAGVGID NVVIEVDAPE IPIMDGSASP FVYLLQSAGI
EELNTAKKFI RIKKPVRIED GDKWAEIRPY NGFRLDFTID FNHPAIESDD QKLVFEFSSQ
SFIKDISRAR TFGFMRDIEY LQSQNLCLGG SFDCAIVLDD YRILNEDGLR FENEFVTHKV
LDAVGDLYMC GHSILGELSA YKSGHALNNQ LLRAVLADQE AWEWTTIEDE KDSPVAFMQP
GMVLA
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