| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2637 |
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| Symbol | |
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| ID | 6988871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2851682 |
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| End bp | 2854405 |
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| Gene Length | 2724 bp |
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| Protein Length | 907 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643380907 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_002263975 |
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| Protein GI | 209696045 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.064807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTCTA AAATCCTAAC TAAAGTTATT GGTAGCCGTA ATGATCGTAC ATTACGTAAG
CTACGTAAAA TTGTTGACCA AATTAATAAA CTTGAACCAC AATTCGAATC ATTACAAGAC
GAAGAATTAA AAGCGAAAAC GATAGAGTTC CGTTCACGTT TAGAACAAGG TGAATCTTTA
GATGATTTAC TGCCAGAAGC ATTCGCAACA GTTCGTGAAG CTTCTAAGCG TTTATATGGC
ATGCGTCATT TTGATGTACA AATGATTGGC GGCATGGTGC TAAACGATAG CCAAATCGCA
GAAATGCGTA CAGGTGAAGG TAAAACATTA ACGGCAACCC TACCATGTTA CTTAAATGCG
TTAACAGGTA AAGGTGTTCA TGTTGTTACT GTGAATGATT ACCTTGCTAA GCGTGATGCA
GAGACAAACC GCGAATTATT TGAATTCTTA GGCATGACAG TTGGTATTAA TGTACCGAAT
ATGCCACCGC AAGAAAAAAA ATTAGCTTAT CAATCCGATA TATTATACGG AACAAACAAT
GAGTTTGGTT TTGACTATCT ACGTGACAAC ATGGCTTTCC GTGCTGAAGA CCGTGTTCAA
CGTGAGCGTT ATTTTGCGGT AATCGATGAA GTGGATTCCA TTTTAATCGA TGAAGCTCGT
ACTCCATTGA TCATTTCTGG TCCTGCAGAC GACAGTTCTG AACTATACAC CCGTATCAAT
ATACTGATCC CTCAACTTGT TAAACAAGAT GAAGAAGACA GCGAAGATTA CCGTGGTGAA
GGTCATTACA CATTAGATGA AAAAGGCAAG CAAACTCATT TAACTGAAAA TGGTCAAGAA
TTTGTTGAAC AATTACTAAA AGATGAAGGC TTAATGGAAG AAGAGGATAC GTTATATTCT
CCTGCTAACA TTAGTTTACT TCATCATATC AATGCGGCAT TACGTGCTCA TGTATTGTTT
GAAAAAGACG TCGATTATAT TGTAAAAGAC GATGAAGTTA TCATCGTTGA TGAACATACT
GGCCGTACTA TGCCTGGTCG TCGTTGGTCT GAAGGGTTGC ACCAAGCTGT AGAAGCGAAA
GAAGGTGTGA AAATTCAAAA TGAAAACCAA ACATTAGCTT CTATCACATT CCAAAACTTC
TTCCGTTTAT ATGACAAACT ATCTGGAATG ACGGGTACCG CTGATACTGA AGCTTTTGAG
TTCCAATCTA TTTATGGTTT AGATACGGTT GTTATCCCAA CGAACCGTCC AATGACTCGT
AATGACATGG GCGATTTGGT CTACATGACT GAAGCTGAAA AATTTGCAGC TATCATTGAG
GACATAAAAG CGTGTTCTGA ACGTGGTCAG CCAGTATTGG TTGGTACTGT TTCAATTGAA
AAATCTGAAT TACTTTCAAA TGCATTGAAA ACAGCAAAAA TTAAGCACAA CGTTCTTAAT
GCTAAGTTCC ATGAACAAGA AGCCGATATC GTTGCTAATG CGGGTACGTC AAGCGCCGTA
ACTATTGCTA CAAACATGGC TGGTCGTGGT ACTGATATCG TGTTGGGTGG TAACTGGCAA
GCAGAAGTTG CTAAGTTAGA TAATCCGTCT GCGGAACAAG TTCAAACCAT TAAAGCGGCT
TGGAAAGAAG CGCATGATAC GGTTTTGACT GCTGGTGGTC TTCATATTAT TGGTACAGAA
CGTCATGAAT CACGTCGTAT TGATAATCAA TTACGTGGTC GTGCTGGTCG TCAAGGTGAT
GCTGGTTCTT CACGTTTCTA CTTATCAATG GAAGATGCGT TAATGCGTAT CTTTGCTTCA
GATCGTGTGT CTAACATGAT GAAAAAGTTA GGTATGGAAG AAGGCGAAGC GATTGAGCAT
CCTTGGGTAA CTAAAGCGAT AGAAAACGCA CAACGTAAAG TTGAAGGTCG TAACTTCGAT
ATTCGTAAAC AATTACTTGA ATACGATGAT GTTGCAAATG ACCAACGTAA AGTCGTTTAT
GAATTACGTG ATGAGTTAAT GAACGTTGAT GATATCAGTG AAATGATTAA TCATAATCGT
CAAGACGTAC TTGAAGGGTT GTTTGGTCAG TATATTCCGC CACAATCATT AGAAGAAATG
TGGGATGTTG AAGGGTTAAC GACTCGCCTA CGCACTGATT TTGATTTGGA TTTACCAATT
CAAGAATGGC TAGATAGCGA TAATAAACTT CATGAAGATA ACCTACGTGA AAAAATTATT
GAAAGTGCAT TCCAAGTTTA TAAAGAGAAA GAAGAGTCTG TTGGCGAATC TGTTCTACGT
AACTTTGAAA AAGCCGTGAT GCTGCAAACG CTTGATGGAT TATGGAAAGA GCACTTAGCG
GCGATGGACC ATTTACGTCA AGGTATTCAT TTACGTGGTT ATGCTCAAAA GAACCCGAAA
CAAGAATACA AGCGTGAGTC ATTTGAGTTA TTTGAAGGTT TACTTGATAC GTTAAAATTA
GATGTTGTTT CAATTTTAAG TAAAGTTAGA GTTCAACAAC AAGAAGATGT TGAACGTATG
GAAGAGCAAC GTCGTAAAAA TGCAGAAGAA GTTGCTCGAC TTCAAAAACT ACAGCATCAA
AATGCAGAAA ATCAACTTGA TGATGGTCAT TCTTCAGATC AAAACCACTC ACCAATGGTA
CGTGATGAAC GTAAAGTTGG ACGAAATGAA GTATGCCCAT GTGGTTCAGG TAAAAAATAC
AAACAATGCC ATGGTAAAAT CTAG
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| Protein sequence | MFSKILTKVI GSRNDRTLRK LRKIVDQINK LEPQFESLQD EELKAKTIEF RSRLEQGESL
DDLLPEAFAT VREASKRLYG MRHFDVQMIG GMVLNDSQIA EMRTGEGKTL TATLPCYLNA
LTGKGVHVVT VNDYLAKRDA ETNRELFEFL GMTVGINVPN MPPQEKKLAY QSDILYGTNN
EFGFDYLRDN MAFRAEDRVQ RERYFAVIDE VDSILIDEAR TPLIISGPAD DSSELYTRIN
ILIPQLVKQD EEDSEDYRGE GHYTLDEKGK QTHLTENGQE FVEQLLKDEG LMEEEDTLYS
PANISLLHHI NAALRAHVLF EKDVDYIVKD DEVIIVDEHT GRTMPGRRWS EGLHQAVEAK
EGVKIQNENQ TLASITFQNF FRLYDKLSGM TGTADTEAFE FQSIYGLDTV VIPTNRPMTR
NDMGDLVYMT EAEKFAAIIE DIKACSERGQ PVLVGTVSIE KSELLSNALK TAKIKHNVLN
AKFHEQEADI VANAGTSSAV TIATNMAGRG TDIVLGGNWQ AEVAKLDNPS AEQVQTIKAA
WKEAHDTVLT AGGLHIIGTE RHESRRIDNQ LRGRAGRQGD AGSSRFYLSM EDALMRIFAS
DRVSNMMKKL GMEEGEAIEH PWVTKAIENA QRKVEGRNFD IRKQLLEYDD VANDQRKVVY
ELRDELMNVD DISEMINHNR QDVLEGLFGQ YIPPQSLEEM WDVEGLTTRL RTDFDLDLPI
QEWLDSDNKL HEDNLREKII ESAFQVYKEK EESVGESVLR NFEKAVMLQT LDGLWKEHLA
AMDHLRQGIH LRGYAQKNPK QEYKRESFEL FEGLLDTLKL DVVSILSKVR VQQQEDVERM
EEQRRKNAEE VARLQKLQHQ NAENQLDDGH SSDQNHSPMV RDERKVGRNE VCPCGSGKKY
KQCHGKI
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