| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2629 |
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| Symbol | pilA |
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| ID | 6988876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2845150 |
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| End bp | 2845566 |
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| Gene Length | 417 bp |
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| Protein Length | 138 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643380900 |
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| Product | type IV pilus subunit PilA |
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| Protein accession | YP_002263968 |
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| Protein GI | 209696038 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACAAGC GTCAAGGACA GAAAGGCTTC ACCTTAATTG AATTAATGAT CGTAGTTGCC
ATCATTGGTG TGTTATCAGC AATAGCTATT CCTGCTTATA AAGATTATGT TTCAAAAAGT
GAGGCTGCGT CTGGGTTAGC AACAATTAAA GCACTGCAAA CACCGGCAGA ATTATTCTTT
CAAGAAAGCG GTACTACTCA ACCAACATTA GCTCAACTAG GAACAACTGC TAAAGCAAAT
ACCTTAGGGG TAATAACAGA TCCTCTTGTT GATAGCGCTA TTGTATTTAC TTTCGGTTCA
GACAGTGCTT TAAATGGCAA AACATTAACA CTAGCAAGAA ATTCTGACAC TGGTTGGTCT
TGTACTCCAT CTACAGGTGT TCCTGTTATG GATGGTTGCA AAATAGTAAC ACCATAA
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| Protein sequence | MNKRQGQKGF TLIELMIVVA IIGVLSAIAI PAYKDYVSKS EAASGLATIK ALQTPAELFF
QESGTTQPTL AQLGTTAKAN TLGVITDPLV DSAIVFTFGS DSALNGKTLT LARNSDTGWS
CTPSTGVPVM DGCKIVTP
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