| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2628 |
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| Symbol | nadC |
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| ID | 6988234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2843902 |
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| End bp | 2844801 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643380899 |
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| Product | quinolinate phosphoribosyltransferase |
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| Protein accession | YP_002263967 |
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| Protein GI | 209696037 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0157] Nicotinate-nucleotide pyrophosphorylase |
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| TIGRFAM ID | [TIGR00078] nicotinate-nucleotide pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACCTCA GCATGATTAA AACCCACGAC AGCGACTCTC GTCTTGAATA TTTAAAACAG
CAACTTCCTG CTGAAATTAC TCGCGCCGTT GCCGATACAC TTCGTGAAGA TCTAGGAGGA
ACACTTGATG TTTCTGCTGA TATCACAGCA AGTTTAATCT CAGAAGACAG TCAATCTGTT
GCGACGATTA TTACCCGAGA ACACGGTGTA TTTTGTGGAA AAATGTGGGC CGAAGAAGTA
TTTAAACAAT TAGGCGGGAC CGTTACGATT GAATGGCACG TAGAAGATGG CGACAAAGTA
AAACCAAACC AAACACTTTG TACATTAAGC GGCCCTTCAC GCGCCCTACT AACGGGTGAG
CGTAATGCGA TGAACTTTAT TCAAACGTTG TCTGGTTGTT CGACTATTAC CGCAACCTAT
GCTGAAAAAA TCGCACACAC AAAATGCCGC TTACTTGATA CGCGTAAAAC CATCCCAGGG
TTACGCAGTG CATTAAAATA CGCCGTCGCG TGTGGCGGTG GTTATAATCA TCGTATCGGT
GTGTTTGATG CTTATCTAAT TAAAGAAAAC CACATCATTG CATGTGGTGG CATTGAAAAG
GCCATTTCAA CGGCAAAAGA ATTGAATCCG GGCAAGCCTG TAGAAGTCGA AACAGAAAGT
TTAGAAGAGT TGCAACAAGC CATTGATGCA GGGGCTGATA TTATTATGCT CGATAATTTC
ACCACAGACA TGATGCGTGA AGCCGTTAAA CTAAACGCAG GTCGTGCTGC ATTAGAAAAT
TCAGGTAATG TCACTTTAGA TACCATCGCG GAATACGCAG AAACAGGGGT CAATTATATC
TCTGTGGGCG CCTTAACTAA GCACCTTACT GCAATGGATT TATCCATGCG TTTTAAATAA
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| Protein sequence | MDLSMIKTHD SDSRLEYLKQ QLPAEITRAV ADTLREDLGG TLDVSADITA SLISEDSQSV
ATIITREHGV FCGKMWAEEV FKQLGGTVTI EWHVEDGDKV KPNQTLCTLS GPSRALLTGE
RNAMNFIQTL SGCSTITATY AEKIAHTKCR LLDTRKTIPG LRSALKYAVA CGGGYNHRIG
VFDAYLIKEN HIIACGGIEK AISTAKELNP GKPVEVETES LEELQQAIDA GADIIMLDNF
TTDMMREAVK LNAGRAALEN SGNVTLDTIA EYAETGVNYI SVGALTKHLT AMDLSMRFK
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