| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2623 |
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| Symbol | lpdA |
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| ID | 6987853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2836169 |
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| End bp | 2837596 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643380895 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_002263963 |
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| Protein GI | 209696033 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.798797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAG AAATTAAAGC ACAAGTTGTC GTACTTGGTG CCGGCCCTGC TGGTTACTCT
GCCGCATTCC GTTGTGCAGA TTTAGGTTTA GAAACAGTTA TCGTTGAACG TTACAACACG
CTTGGTGGTG TATGTTTGAA TGTGGGTTGT ATCCCATCAA AAGCCTTGCT TCACGTAGCT
AAAGTTATCG AAGAAGCAAA AGCGATGGCC GCTCACGGTA TCGTATTTGG TGAACCTCAA
ACTGACATCG ATAAGATCCG TTTGTGGAAA GAAAAAGTAG TAACACAACT AACTGGCGGT
CTTGGCGGTA TGGCCAAGAT GCGTAAAGTA ACGGTAGTTA ATGGCTTTGG TAAATTTACT
GGTGCTAATA CTATTGAAGT GACTGCTGAA GATGGCAATA CAACAATCAA TTTTGATAAT
GCGATTGTTG CTGCTGGTTC TCGTCCAATT AAACTGCCAT TCATCCCACA TGAAGATCCA
CGTATTTGGG ATTCAACGGA TGCACTTGAG CTAAAAGAAG TCCCTAAGAA GCTGCTTATT
ATGGGCGGTG GTATTATCGG TCTAGAAATG GGTACGGTTT ACCATGCTCT GGGTTCTCAA
GTTGATGTTG TTGAGATGTT TGACCAGGTT ATTCCTGCGG CAGATAAAGA TATCGTTAAA
GTTTACACTA AACGTATCAA AGACAAATTC AATCTAATGC TTGAAACGAA AGTGACAGCA
GTAGAAGCAA AAGAAGACGG TATTTACGTA TCAATGGAAG GCAAAAAAGC ACCAGCAGAA
GCTGAGCGTT ATGATGCTGT TCTTGTTGCT ATCGGCCGTG TTCCTAATGG TGCTTTATTA
GACGTTGAAA AAGCAGGAGT TGCTGTTGAT GAGCGTGGTT TCATCAATGT AGATAAGCAA
ATGCGTACTA ATGTACCTCA TATTCATGCC ATTGGTGATA TCGTAGGTCA ACCTATGCTT
GCACACAAAG GCGTGCATGA AGGTCATGTT GCTGCGGAAG TTATTTCTGG TAAGAAGCAC
TACTTCGATC CTAAAGTAAT TCCTTCAATT GCGTACACGG AGCCCGAAGT TGCTTGGGTT
GGTAAAACAG AGAAAGAAGC AAAAGCTGAA GGCATCAACT ACGAAGCTGC AAGCTTCCCT
TGGGCCGCAT CAGGTCGTGC AATCGCTTCA GATTGTGCAG ATGGTCTTAC TAAGCTTCTT
TTTGATAAAG ATACTAACCG TGTTATCGGT GGTGCTATTG TTGGTACTAA CGCTGGTGAG
CTTCTTGGTG AAATCGGTCT TGCAATTGAA ATGGGTTGTG ATGCTGAAGA TATCGCATTA
ACTATCCATG CTCACCCAAC ATTGCATGAA TCAATTGGTA TGGCTGCTGA AATTTATGAA
GGTTCTATTA CTGACCTTCC AAATGCAAAA GCCGTTAAGA AAAAATAA
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| Protein sequence | MSKEIKAQVV VLGAGPAGYS AAFRCADLGL ETVIVERYNT LGGVCLNVGC IPSKALLHVA
KVIEEAKAMA AHGIVFGEPQ TDIDKIRLWK EKVVTQLTGG LGGMAKMRKV TVVNGFGKFT
GANTIEVTAE DGNTTINFDN AIVAAGSRPI KLPFIPHEDP RIWDSTDALE LKEVPKKLLI
MGGGIIGLEM GTVYHALGSQ VDVVEMFDQV IPAADKDIVK VYTKRIKDKF NLMLETKVTA
VEAKEDGIYV SMEGKKAPAE AERYDAVLVA IGRVPNGALL DVEKAGVAVD ERGFINVDKQ
MRTNVPHIHA IGDIVGQPML AHKGVHEGHV AAEVISGKKH YFDPKVIPSI AYTEPEVAWV
GKTEKEAKAE GINYEAASFP WAASGRAIAS DCADGLTKLL FDKDTNRVIG GAIVGTNAGE
LLGEIGLAIE MGCDAEDIAL TIHAHPTLHE SIGMAAEIYE GSITDLPNAK AVKKK
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