Gene VSAL_I2619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2619 
SymbollitR 
ID6988679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand+ 
Start bp2833164 
End bp2833769 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content37% 
IMG OID643380893 
ProductHTH-type luminescence regulator LitR 
Protein accessionYP_002263961 
Protein GI209696031 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACGA TCCAAAAAAG ACCGAGAACT AGGCTATCTC CAGAGAAACG AAAAGAACAA 
CTACTTGATA TTGCGATTGA GGTTTTTTCT CAACGTGGTA TTGGTCGTGG CGGTCATGCA 
GATATAGCAG AAATTGCTCA AGTATCTGTT GCTACGGTAT TTAATTACTT CCCAACCCGA 
GAAGATCTGG TTGATGATGT ATTAAATCGA GTTGAACAAC AATTTCATAA CTTCATTCTC 
AATTCAATCT CATTAGACCG AGATGTACGC TCCAATCTTC ACTCTTTACT CGTGAACATC 
ATAGATACAG TTCAAATGGA TAATAAGTGG ATTAAAGTGT GGTTTGAATG GAGCACCTCT 
ACTCGCGAAG AAGTATGGCC TCTTTTCTTA AGCACTCAAG TGAATAACCA AAAAGTTATT 
CATGATATGT TTGCTGAAGG GATTGAGCGT AACGAAGTAT GTAATGATCA TACCCCTGAA 
AACTTAGCTA AAATGCTTCA TGGGATTTGT TACTCTGTAT TTATTCAAGC AAACCGTAAT 
AGCTCTTATG AAGAACTAGA ACAAACGGCA AATTGCTTTT TAAATATGCT GTGTATCTAT 
AAGTAG
 
Protein sequence
METIQKRPRT RLSPEKRKEQ LLDIAIEVFS QRGIGRGGHA DIAEIAQVSV ATVFNYFPTR 
EDLVDDVLNR VEQQFHNFIL NSISLDRDVR SNLHSLLVNI IDTVQMDNKW IKVWFEWSTS 
TREEVWPLFL STQVNNQKVI HDMFAEGIER NEVCNDHTPE NLAKMLHGIC YSVFIQANRN 
SSYEELEQTA NCFLNMLCIY K