| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2582 |
|---|
| Symbol | |
|---|
| ID | 6987832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | + |
|---|
| Start bp | 2782038 |
|---|
| End bp | 2782913 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643380850 |
|---|
| Product | glucosamine kinase |
|---|
| Protein accession | YP_002263928 |
|---|
| Protein GI | 209695998 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2971] Predicted N-acetylglucosamine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATC TGTATGTAGG TATTGATGGT GGCGGTACAT CTTGTCGTGC TCGAATTCGC
AATAAACAAG GCGAATTACT TGGTGAAGCT AGGAGTGGCA GTGCGAATAT CTTACTTGGT
ATCAATGTCG CGATGGATTC AATTATCACC GCAATTACTC AAGCATCGTC ACAACATCAA
CTAACAGAAC TCGACTTTAC ACGTATGCAT GTTGGTCTTG CTCTCGCGGG TGCAGAACAA
AAATCGGCAT GGTATGCATT CATGGAATTA GAACACCCGT TTGCATCTAT GGTGTTAAAT
ACTGATGCAT ATGGTGCCTG TCTCGGTGCT CATAATAGCG ATAATGGTGC AATAATGATC
GCAGGAACAG GGTCTTGTGG GATTTATATT AATGATGGAA AACAACATGT TGTCGGCGGA
AGAGAATTCC CTATCTCAGA CCAAGGTGGA GGGGCAATTA TGGGATTGCG TTTAATTCAA
AATACCCTTT TAGCTTATGA TGGTATAAAA CCTACGACAA CTCTAACCGA TCATGTTATT
CATCATTTCA ACCATGATAT CGACAGTATC GTTGACTGGT CTAAACGCGC TCGACCATGT
GATTATGGCC AGTTCTCTCC TGAGATTTTC TCTTTCGCAC TACAAGGCGA TACGTTAGCG
ATTGACCTGT TAAAACAAAC AGCAACTGAC ATCGAGCTGT ATTTAACGGC ATTGCATAAT
AAAGGCGCAA CAAGAATTGC ATTAATGGGA AGTATTGGGG AACGCATTGT TGAATGGCTA
TCGCCTTCTA TTCGCCAATA TTTAGTACAA CCACAATTTG ATGCTATTGA AGGTGGCATC
CTGATGGCAG GAAAAGCAGA ACATAACCTG TTCTAG
|
|---|
| Protein sequence | MTDLYVGIDG GGTSCRARIR NKQGELLGEA RSGSANILLG INVAMDSIIT AITQASSQHQ
LTELDFTRMH VGLALAGAEQ KSAWYAFMEL EHPFASMVLN TDAYGACLGA HNSDNGAIMI
AGTGSCGIYI NDGKQHVVGG REFPISDQGG GAIMGLRLIQ NTLLAYDGIK PTTTLTDHVI
HHFNHDIDSI VDWSKRARPC DYGQFSPEIF SFALQGDTLA IDLLKQTATD IELYLTALHN
KGATRIALMG SIGERIVEWL SPSIRQYLVQ PQFDAIEGGI LMAGKAEHNL F
|
|---|
| |