| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2579 |
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| Symbol | |
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| ID | 6987829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2778264 |
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| End bp | 2779247 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643380847 |
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| Product | ABC-type [(GlcNAc)2] transporter, ATP-binding protein |
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| Protein accession | YP_002263925 |
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| Protein GI | 209695995 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGACC CGCAAATTTC TATCCGCAAT CTGTGTGTGG ATTACATTAC TGAATCAGGT
GATGTACGTG CTGTAAACAA TGTGAGTTTT GACATTGGTA AAGGTGAAGT CTTTGGTTTA
GCAGGTGAAT CTGGTTGTGG AAAATCAACT ATTGCATTCT CTTTAATGCG CTTGCATAAG
CCACCAGCAT TTATCACTGG TGGTGAAGTA ATATTCGATG GCCGTGATAT TTTAAAATAC
AGCGATAAAC AAATGCAGGC ATTCCGTTGG AGTGAAATGT CCATGGTATT CCAAAGTGCC
ATGAACGCAT TGAACCCTGT ATTAACAATC GAAGAGCAAT TTTGTGACGT AATTATGCGC
CACACAACGA TGACTCGTGC ACAAGCGATT GTTCGTGCTC AAGGTTTGTT AGAAATTGTT
GATATTCACC CAAACCGTTT AACGGATTAC CCTCACCAGT TTTCTGGTGG TATGCGTCAA
CGCTTGATGA TTGCTATTGC ATTAGCACTT AATCCTAAAA TGATCATCAT GGACGAACCA
ACAACCGCAC TTGATGTTGT CGTTCAACGT GAAATTCTAC AGAAAATTTA CGCGCTTAAA
GAAGAGTTTG GTTTTTCTAT TCTATTCATT ACGCACGAAC TATCGTTAAT GGTTGAGTTT
TCTGATCGCA TTGAGATCAT GTACTCAGGT GAGTTAATTG AAGTTGCCTC TTCAAAGGAG
ATCTTAACCT CACCTTACCA CCCATATACG AAAGGGTTGG GGAGTTCATT TCCACCACTA
ACGGGGCCAA AAACTAAGTT AACAGGTATC CCAGGAAACC CATTAAATTT ACTTGAGATC
CCACAAGGCT GCCGCTTCCA ATCACGTTGT GACCGCGTAC ACGATACATG TCGTTCAGTA
CCGACACAAT TACGTCAGAT TGAAATTGGC CACTTATCTA ATTGTCATCT ATACGGTGAT
CCAATTAGAC AAGCAAAAGC ATAA
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| Protein sequence | MTDPQISIRN LCVDYITESG DVRAVNNVSF DIGKGEVFGL AGESGCGKST IAFSLMRLHK
PPAFITGGEV IFDGRDILKY SDKQMQAFRW SEMSMVFQSA MNALNPVLTI EEQFCDVIMR
HTTMTRAQAI VRAQGLLEIV DIHPNRLTDY PHQFSGGMRQ RLMIAIALAL NPKMIIMDEP
TTALDVVVQR EILQKIYALK EEFGFSILFI THELSLMVEF SDRIEIMYSG ELIEVASSKE
ILTSPYHPYT KGLGSSFPPL TGPKTKLTGI PGNPLNLLEI PQGCRFQSRC DRVHDTCRSV
PTQLRQIEIG HLSNCHLYGD PIRQAKA
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