Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2563 |
Symbol | gltD |
ID | 6988606 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 2749866 |
End bp | 2751338 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643380828 |
Product | glutamate synthase subunit beta |
Protein accession | YP_002263910 |
Protein GI | 209695980 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCAAGC CTACAGGTTT TTTAGAAAAT GGTCGTGAGT TACCAAAAAA ATTAGAACCA ATTGTTCGAA TTCAAGATAA TAAAGAATTT GTCTTAAACG AAGAATTTGG CGATAAAATC AATACGCAAG CATCTCGCTG TATGGATTGT GGTGTTCCGT TTTGTCATAA CGGATGCCCT ATTGGGAACA TCATTCCGGA ATTTAACGAT GCCGTATATC GCGATAGCTG GGAAGAAGCT TGGCATATTC TAAGCTCAAC AAATAACTTT CCTGAATTTA CAGGCCGTGT ATGCCCTGCT CCTTGTGAAA GTGCATGTGT ATTAGGGATC AATCAAGATC CAATCACAAT CTGTAATATT GAAAAAACAA TCGTTGAGAC TGCGTATCGT GAAGGATACG CACAACCTAA AAAGCCTCGT TCCCGTACAG GAAAAACTGT CGCGATTATT GGTTCAGGTC CTGCCGGCTT AGCTGCTGCA GAGCAAATCA ATAGTGCAGG CCATTCAGTC ACTGTTTTTG AACGAGATGA GAAAGTTGGT GGCTTATTAC GTTTCGGTAT TCCTGATTTC AAACTAGGAA TGGATATCAT TGATCGAAAG ATCAATTTAA TGGCCGAAGC CGGTATTAAG TTTGAAGTAA ATGCACATAT TGGCGTTTCA ATTAATGCTC AACAACTGCG CCAAGATTTT GATGTTGTAT TACTGACTGG TGGTTCAACA GTACCAAGGG ATCTTCCTAT TCCTGGTCGT GAATTAAATG GGGTTCATTT TGCAATGGAA TTCCTAGGTC AAAACAATCG CCGAGCGAAC AATATGGATC TTAAAACAAA AGAGATCCAT GCAAAAGATA AACATGTTGT CGTTATCGGT GGTGGCGATA CAGGATCAGA TTGCGTAGGT ACTTCTAACC GTCATGGTGC AGCAAGCATT ACTCAAGTTG AGATAATGCC TATTCCACCA GAAAAGCGCC CAGCGAATAT GCCTTGGCCT CAATACCCAA TGATCATGAA AACAACGACT TCCCACGAAG AAGGCTGTGA GCGTCATTGG AACATTTTAA CTAAAGAGTT TATCTCTGAT GATGAGGGTA ATGTCACCGG CCTCCGTATT GCTGATATCG TTTGGCAAGA TGCCAAACCT GGAGAGCGAC CTGGTTTTAA CGAAGTAGCA AATAGTGAGC GAGTTATACC ATGTGATCAA GCTTTCTTAG CTATGGGATT TTTACACCCA GAACCTACGG GTGTTCTAGC TCAATTAGAT ATTAAACTTG ATGATCGTGG CAACGTTGCT ACCAATGGTT TTTCTACTAA CCAAAAAGGT GTTTTTGCTG CAGGTGATAT GCGTACAGGG CAATCATTAA TTGTACGTTG TATTAATGAA GGTCGTGAAT GTGCGCGTGA AGTTGACGCT TATCTTATGG GGAATACAAA CTTAGAAGCG AAAGCAGGCT CTCTAATGCT ATCAGCATCA TAA
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Protein sequence | MGKPTGFLEN GRELPKKLEP IVRIQDNKEF VLNEEFGDKI NTQASRCMDC GVPFCHNGCP IGNIIPEFND AVYRDSWEEA WHILSSTNNF PEFTGRVCPA PCESACVLGI NQDPITICNI EKTIVETAYR EGYAQPKKPR SRTGKTVAII GSGPAGLAAA EQINSAGHSV TVFERDEKVG GLLRFGIPDF KLGMDIIDRK INLMAEAGIK FEVNAHIGVS INAQQLRQDF DVVLLTGGST VPRDLPIPGR ELNGVHFAME FLGQNNRRAN NMDLKTKEIH AKDKHVVVIG GGDTGSDCVG TSNRHGAASI TQVEIMPIPP EKRPANMPWP QYPMIMKTTT SHEEGCERHW NILTKEFISD DEGNVTGLRI ADIVWQDAKP GERPGFNEVA NSERVIPCDQ AFLAMGFLHP EPTGVLAQLD IKLDDRGNVA TNGFSTNQKG VFAAGDMRTG QSLIVRCINE GRECAREVDA YLMGNTNLEA KAGSLMLSAS
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