| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2560 |
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| Symbol | arcB |
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| ID | 6987816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2741396 |
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| End bp | 2743762 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643380826 |
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| Product | aerobic respiration control sensor protein ArcB |
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| Protein accession | YP_002263908 |
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| Protein GI | 209695978 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAGT TAAAAATTCT TGCGCAGTTT TATGTCGATC TTATGGTTAG GCTTGGGATC
GTCCGTTTTA GTCTCTTACT TGCCATCGCT CTTGTTGCTT TAGCTGTCAT TGTTCAAGTT
GGAGTGACTC TCGTCTTGAG TGGTGAAGTT AATGATTTAG ACATTGTACG ATCTGTTTTT
TTTGGTTTAC TGATCACTCC TTGGGCTGTT TTCTTTTTAT CAGTAGTCGT TGAACACTTA
GAAGATTCTC GTCAACGCTT ATCTAAATTG GTTGGTAAAT TAGAAGAAAT GAGAACTCGT
GATCTTGATT TAAATAAAAA ATTAAAAGGT AACGTCAAAA AACTGAATCA AGAAATAGAA
GAGCGAGAAA AAGCAGAAGA GGCTCGCCAA GAAGCGATGG GGGATTTGGA AAATGAGGTC
TTTCATCGAG AAAAAGCACA ATTAGAATTA GCTGAGCAAA CTGCGTTATT GCGATCTTAC
CTTGATACTT CCCCCGATAT AATTTATTAC CGTAATGAAT TAGGTTTTTT CTCTGGCTGT
AATAAAGCCA TGGAGGATCT CATCGGTAAA TCTGAAAAAG AACTGATTGG ATTATCACCT
AAAGATGTTT ATAGCATTGA AGTCGCGACT AAAGTCATTG ATACCGATAG ACAAGTTCTT
AAAGAGAACC AAGCATTAAC GTATGAACAG TGGCTTGATT ATCCTGATGG CAGAAAAGCG
TGTTTTGAAT TAAGCAAAAT CCCTTTTTAT AGTAAAGATG GTCGTCACTT AGGTTTGGTT
GGTTTTGGAC GAAACATAAC GGATCGTAAA AGTTACGAAG AGGCCCTAGA AAAAGCCAGT
CGTGACAAAA CAACATTTAT ATCAACAATC AGTCATGAAT TACGAACACC ACTTAATGGT
ATTGTCGGAT TAAGTCGTAT GCTGCTTGAT ACCCGTCTTG ATGATGAACA ACATAATTAT
ATGCGAACTA TTAATGTCAG TGCGATCACT TTGGGTAATA TATTTAACGA TATTATTGAT
ATGGATAAAT TTGATCGCCG TAGATTAGAA CTATTACCTA AGCCTCTTGA TTTTATTAGT
TTTGTTACTG AAATGGAAAA TATATCAGGA TTAATGGCAG AGCAAAAAGG GCTGCGTTTT
GATCTAGAAA GACTAACGAG CCTTCCCGCG CATATCTGTG TTGATAGTAC TCGTTTACGA
CAAGTTCTTT GGAATTTAAT CGGGAATGCG ACTAAATTCA CGAAAGAAGG CGGAGTTGTG
ATGTCCGTGA GTGCCGATAT ACACGGTGAC AATGCAGATA TAACTTTTGA AGTGGAAGAT
TCAGGAATTG GGATCCCTGA GTCTGAATTA GAAAATGTGT TTACTATGTA TTATCAGGTG
AAACAAGGCA AAGATAATTT ACATGCAGTA GGGACTGGTA TTGGTTTAGC GGTATCTAAA
GAATTAATTA ACTTGATGGG AGGGGACATT ACAGTAACCA GTGATGTCGG GTTTGGTAGT
ACGTTTATTG TCTCTATCAA CGTCCCCTTG GTTGATCATG TTGAAGAAGA AGAAGCAATG
CCTGAGATGA AAAGTGCAAA ATCTTTGCGA ATTTTTATGC TTGAGGATAT TGAACTGAAT
ATTACCGTCG CTCGTTCGTT GCTTGAAAGT TTAGGTCATA CCGTCGATGT GGCTATGTGT
GGTGAAGATG CAATCAATCA ATTTGATCCC ACAAACTATG ATTTAGCGTT ATTAGATATT
CAATTACCTG ACATGACTGG ATTTGATGTC GCTCAAATAT TTAGAGAAAA ATATGAGGAA
TTACCACCGT TAGTTGCTTT AACGGCTAAT TTATTAAAAG AAAAAGACGA ATACTTTGAA
AAAGGTATGG ATGAAGCCAT CAGCAAACCG TTAAGTGTTA AAGCGTTAAC TGAAGTACTT
GAACTGTTCT CTATCTCCGA TGAAAAAGAG AGAGAGAAAG AAAATAAAGT GGCTCAAATT
AAAACGGCAG AACAACTTGA GAGTGAGCAT TTAATTGATA CTTTACTCGA TTTAGAAATG
CTTGAGTCGT ACATCGAGAT AGTTGGTACA AAACCTATTT ATACCAGCAT CGAAATGTTT
GAAAGCAGTA TGAAAGAATA TATTCAAATA CTTGATTCAA ACATGACAGC ACGAGATCAA
GATGGCATTG TATTTGAGAC TCATAAAATG AAAGGGGCTG CGGGATCCAT TGGTTTAAAG
CATATTCAAC AAGTGGCCCA AAAAGCACAG TCTCCAGATT TACCAGCGTG GTGGGAGAAT
ATTGATGATT GGGTTGAAGA AATTAAAAAT GAATATGAAA ATGATATTCA AGTACTAAAA
AGTTGGTTAA AGCAGCGACA AAATTAA
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| Protein sequence | MKQLKILAQF YVDLMVRLGI VRFSLLLAIA LVALAVIVQV GVTLVLSGEV NDLDIVRSVF
FGLLITPWAV FFLSVVVEHL EDSRQRLSKL VGKLEEMRTR DLDLNKKLKG NVKKLNQEIE
EREKAEEARQ EAMGDLENEV FHREKAQLEL AEQTALLRSY LDTSPDIIYY RNELGFFSGC
NKAMEDLIGK SEKELIGLSP KDVYSIEVAT KVIDTDRQVL KENQALTYEQ WLDYPDGRKA
CFELSKIPFY SKDGRHLGLV GFGRNITDRK SYEEALEKAS RDKTTFISTI SHELRTPLNG
IVGLSRMLLD TRLDDEQHNY MRTINVSAIT LGNIFNDIID MDKFDRRRLE LLPKPLDFIS
FVTEMENISG LMAEQKGLRF DLERLTSLPA HICVDSTRLR QVLWNLIGNA TKFTKEGGVV
MSVSADIHGD NADITFEVED SGIGIPESEL ENVFTMYYQV KQGKDNLHAV GTGIGLAVSK
ELINLMGGDI TVTSDVGFGS TFIVSINVPL VDHVEEEEAM PEMKSAKSLR IFMLEDIELN
ITVARSLLES LGHTVDVAMC GEDAINQFDP TNYDLALLDI QLPDMTGFDV AQIFREKYEE
LPPLVALTAN LLKEKDEYFE KGMDEAISKP LSVKALTEVL ELFSISDEKE REKENKVAQI
KTAEQLESEH LIDTLLDLEM LESYIEIVGT KPIYTSIEMF ESSMKEYIQI LDSNMTARDQ
DGIVFETHKM KGAAGSIGLK HIQQVAQKAQ SPDLPAWWEN IDDWVEEIKN EYENDIQVLK
SWLKQRQN
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