Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2552 |
Symbol | nfo |
ID | 6989357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2732391 |
End bp | 2733239 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643380817 |
Product | endonuclease IV |
Protein accession | YP_002263900 |
Protein GI | 209695970 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0648] Endonuclease IV |
TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATATA TTGGGGCACA TGTGTCTGCG GCCGGTGGTG TTGATCAAGC GCCAAAACGT GCATATCAAA TGGGGGCTAC AGCGTTTGCA TTATTTACTA AAAATCAGCG CCAATGGGTA GCTAAGCCGT TAACAAAAAA GATCATCTCT GATTTTAAAG CAAATTGTAA GCGTTTTGGA TTTGAACCTT CTCAAATATT ACCGCATGAC TCTTATTTAA TTAATCTTGG TGCGCCAGAA GAAGAAAAGC TAGAGAAATC TCGCGCGGCA TTTATTGATG AAATGGAGCG TTGTGAACAA TTAGGGCTCA CTTTGCTCAA TTTTCATCCA GGCAGCCATT TAAAGAAGAT CTCAGAAGAT GAGTGTCTTA CCCTTATTTC TGAATCCATT AATCTCGCGC ATCAAGCCGT GCCGAATGTG ATTGCTGTGA TTGAGAATAC GGCTGGCCAA GGAACGAATC TTGGATGGAA ATTTGAACAT TTAGCTCAGA TTATCAGTCA AGTTGAAGAT AAGTCTCGTG TCGGTATATG CCTTGATACA TGCCATACAT TCGCCGCTGG TTATGACTTA AGATCTAAAG AGGCTTGCGA GCATACTTTT TCTGAATTTG AACGTATTGT TGGTTTTCAA TACTTGCGTG GTATGCACAT CAATGACGCC AAAATTGAGC TAGGCAGTCG TGTCGATCGC CATCAATCTT TAGGTGAAGG CACGATTGGA TGGGATTGCT TTAAGTACAT TATGCAAGAT GATCGTTTTA ATGGCATTCC TTTAGTATTA GAGACGATAA ACCCTGATAT TTGGAAGGAT GAAATCGCTC AACTTAAAGA ACTCAGTGAG AAAAAATAA
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Protein sequence | MKYIGAHVSA AGGVDQAPKR AYQMGATAFA LFTKNQRQWV AKPLTKKIIS DFKANCKRFG FEPSQILPHD SYLINLGAPE EEKLEKSRAA FIDEMERCEQ LGLTLLNFHP GSHLKKISED ECLTLISESI NLAHQAVPNV IAVIENTAGQ GTNLGWKFEH LAQIISQVED KSRVGICLDT CHTFAAGYDL RSKEACEHTF SEFERIVGFQ YLRGMHINDA KIELGSRVDR HQSLGEGTIG WDCFKYIMQD DRFNGIPLVL ETINPDIWKD EIAQLKELSE KK
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