Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2545 |
Symbol | |
ID | 6989239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2725835 |
End bp | 2726530 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643380810 |
Product | hypothetical protein |
Protein accession | YP_002263893 |
Protein GI | 209695963 |
COG category | [S] Function unknown |
COG ID | [COG2968] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.394305 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA TTGTTAGTGC ATTATGTTTA TCTGCTTTGA TTTCCCCTGC TGCATTTGCT GAATCACCAG AGTTTCCTCA TTTGGAAGTG TCTGGAGAGG GTAAGGTACT GGTTGTTCCT GATATGGCTC AGTTTTCTGT TGATGTGGTA GAAAGTAAAG CAACAGCAGA AAAAGCGAAG CAAGCTGCTG ACAAGGCAGT GATCGGATTT TTAGCTCGTT TAGAAGTACA AGGTGTTAAG CGAGAGAATA TTAATAGTGG CAATATTCGT TTAACACCCG AATATCGTTA CCCGAAAGGG CAGAAACCTG AATTAGTTGG TTATAAAGCG ATTCGCAACA TTACTGTTAC GGTGATGGAT TTAAATAAAC TGAATGGGTA TTTAGATAAA GCTTTAGGTG ATGGAATTAA TCGAATTAAT CACATTGAAC TTAAAACAAG CAAAGAAAAA GAATATATTG AAGCTGCGCG TTTAGAAGCA ATTAAAGATG CAAATAATAA AGCCGCTTCT TTGGCGAAAG GTTTTGGTAC ATCAGTGAAA GGCGTCTGGA AGATTTCTTA TCATAATAAT TATAGCCAAC CTGTAATGAT GAAAGCGATG CGTATGGACA GTTCTGCAAA TACAGCTGAA AGCTACCAAG ATACACAAAT GGTTATCTCT GACAGTGTTT CGGTTGTTTA TCGTTTAAAA GAATAA
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Protein sequence | MKKIVSALCL SALISPAAFA ESPEFPHLEV SGEGKVLVVP DMAQFSVDVV ESKATAEKAK QAADKAVIGF LARLEVQGVK RENINSGNIR LTPEYRYPKG QKPELVGYKA IRNITVTVMD LNKLNGYLDK ALGDGINRIN HIELKTSKEK EYIEAARLEA IKDANNKAAS LAKGFGTSVK GVWKISYHNN YSQPVMMKAM RMDSSANTAE SYQDTQMVIS DSVSVVYRLK E
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