| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2523 |
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| Symbol | recO |
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| ID | 6988955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2705499 |
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| End bp | 2706215 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643380787 |
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| Product | DNA repair protein RecO |
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| Protein accession | YP_002263871 |
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| Protein GI | 209695941 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
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| TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0679966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAGAAG GCTTACAACG TTGTTTTGTC CTGCACCGTA GACCGTATAG CGAAAGCAGT
CTAATTTTAG ATGTATTTAG CGAAGAGTAT GGCCGTTTAT CTATTATCTC TAAAGGGGCA
CGCAGTAAGC GTTCAAACCT TAAAGGTGTA TTACAAGCAT TTACACCGCT ATTGATGAAA
TGGTCGGGTA AAGGCTCAAT GCGAACTTTG CGTCAAGCTG AAACTATCAG TCTGGCTATT
CCTCTCACTG GAATTAATTT ATATTCAGCC TTATACATTA ATGAACTAGT GGTAAGGGTG
ATTGAACAAG AAACCCCGTA TCCTGCTTTA TTTCTCGATT ATCTCACCGC ATTGACTGAA
CTTGCTCAGA CTAAAAACCC AGAACCTGCA TTAAGACGTT TTGAATTGGC TTTACTGTCG
TCATTGGGTT ATGGCGTGGA TTTCTTGCAT TGCGCAGGCA GTGGTGAAAT GGTTTCTCCT
GAAATGACGT ATCGCTACAG AGAACAGAAA GGGTTCATGG CATCGATTCG ACACGACCCT
TTAATGAGTT TCAAAGGTGA TGAACTTATC GCTATCAGTG AGCGTCGATT TATAACACCA
GAGCAATTAA AAGCGGCAAA ACGCTTTACA CGTATAGCCT TAAAGCCGTA TCTTGGCGGT
AAGCCCCTAA AAAGTAGGGA ACTGTTTCTT CCAAGAACAA GGAGTATTCT AAAATGA
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| Protein sequence | MEEGLQRCFV LHRRPYSESS LILDVFSEEY GRLSIISKGA RSKRSNLKGV LQAFTPLLMK
WSGKGSMRTL RQAETISLAI PLTGINLYSA LYINELVVRV IEQETPYPAL FLDYLTALTE
LAQTKNPEPA LRRFELALLS SLGYGVDFLH CAGSGEMVSP EMTYRYREQK GFMASIRHDP
LMSFKGDELI AISERRFITP EQLKAAKRFT RIALKPYLGG KPLKSRELFL PRTRSILK
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