| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2522 |
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| Symbol | pdxJ |
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| ID | 6988220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2704771 |
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| End bp | 2705502 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643380786 |
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| Product | pyridoxine 5'-phosphate synthase |
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| Protein accession | YP_002263870 |
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| Protein GI | 209695940 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0854] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00559] pyridoxine 5'-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.13808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTTCAA TTTTACTTGG CGTCAATATC GATCACGTAG CCACTCTTCG TAATGCAAGA
GGGACTAAAT ACCCCGATCC AGTGCACGCT GCTGAAATTG CAGAACGTGC AGGTGCTGCG
GGTATTACGA TTCATCTACG TGAAGATCGT CGTCATATAA AAGATCGTGA TGTGCGAATT
TTACGTGAAA CACTGCAAAC TCGAATGAAT TTAGAAATGG CAGTGACGGA TGAAATGGTC
GGAATTGCAT TAGAAACACA GCCAGAATTT GTTTGTCTTG TGCCAGAAAA GCGTGAAGAG
TTAACTACTG AAGGTGGTTT GAATGTCGTT GGTCAACTTG AAAAAGTGAA AGCCGCAACT
CAAACGTTAT CAAAAGCAGG TATTAAAGTA TCCTTGTTTA TTGATGCAGA TAACGCCCAG
ATTGATGCAG CTGTTGCGTG TGGGGCTCCT TTTATTGAGC TTCATACTGG TGCGTATGCT
GATGCAGAAA CAGAAGAAGC CGAACAAATT GAATTGAAAA AAATTGCGGC AGGGGCAACT
TATGCGGCAA GTAAAGGGCT GATTGTTAAT GCGGGTCATG GTTTGACGTA TCACAATGTT
GAAGCTATCG CAGCATTGCC TGAAATCTAT GAGTTAAATA TTGGTCACTC GATTATGGGA
AGAGCGGTGT TTGATGGATT AGAGAAAGCG GTCGCTGATA TGCATAGAAT TATGCTAGGT
GCTCGTAAGT AA
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| Protein sequence | MSSILLGVNI DHVATLRNAR GTKYPDPVHA AEIAERAGAA GITIHLREDR RHIKDRDVRI
LRETLQTRMN LEMAVTDEMV GIALETQPEF VCLVPEKREE LTTEGGLNVV GQLEKVKAAT
QTLSKAGIKV SLFIDADNAQ IDAAVACGAP FIELHTGAYA DAETEEAEQI ELKKIAAGAT
YAASKGLIVN AGHGLTYHNV EAIAALPEIY ELNIGHSIMG RAVFDGLEKA VADMHRIMLG
ARK
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